RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 HLA-DQB1P01920 261 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 SNRNP70P08621 437 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 SAA2P0DJI9 122 aaPredicted RBP7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 CEACAM6P40199 344 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 TMBIM6P55061 237 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 RAG2P55895 527 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 TAS2R20P59543 309 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 ZNF816Q0VGE8 651 aaPredicted RBP7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 Q3ZCU0 254 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 RPL39P5Q59GN2 51 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 LY6G6FQ5SQ64 297 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 CROCCP3Q8IVE0 287 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 LYG1Q8N1E2 194 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 LINC01006Q8NI28 216 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 RPEQ96AT9 228 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 ST6GALNAC5Q9BVH7 336 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 MRPL20Q9BYC9 149 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 RIMS4Q9H426 269 aaPredicted RBP7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 ZNF702PQ9H963 129 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 SCOCQ9UIL1 159 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 RNF150Q9ULK6 438 aa7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 AMMECR1Q9Y4X0 333 aaPredicted RBP7.54□□□□□ -1.2
NPLOC4-219ENST00000576713 CTDSP2O14595 271 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 XRCC3O43542 346 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 TSPAN9O75954 239 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 NDUFA7O95182 113 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 IGKV1D-33P01593 117 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 IGKV1-33P01594 117 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 ZNF182P17025 639 aaPredicted RBP7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 DTYMKP23919 212 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 CEACAM3P40198 252 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 RORCP51449 518 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 HNF4GQ14541 408 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 RNF151Q2KHN1 245 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 TMEM95Q3KNT9 176 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 TMEM30BQ3MIR4 351 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 DHRS7BQ6IAN0 325 aaPredicted RBP7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 Q6ZS49 121 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 ZNF833PQ6ZTB9 187 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 MOB3BQ86TA1 216 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 KRTAP19-1Q8IUB9 90 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 LAX1Q8IWV1 398 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 Q8N6K4 173 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 OR4A4PQ8NGN8 299 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 RAB2BQ8WUD1 216 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 CAPSLQ8WWF8 208 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 CREB3L1Q96BA8 519 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 NABP2Q9BQ15 211 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 TOLLIPQ9H0E2 274 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 ABCB10Q9NRK6 738 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 RDH8Q9NYR8 311 aa7.53□□□□□ -1.2
NPLOC4-219ENST00000576713 A0A0A6YYH2 397 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 IGKV1D-13A0A0B4J2D9 117 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 BTBD17A6NE02 478 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 A6NJ64 397 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 OOSP1A8MZH6 123 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 TMEM127O75204 238 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 APOA1P02647 267 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 GAPDHP04406 335 aaKnown RBP7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 IGKV1-13P0DP09 117 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 ZBTB25P24278 435 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 CNTFRP26992 372 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 TALDO1P37837 337 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 RANBP1P43487 201 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 RAB7AP51149 207 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 PROK1P58294 105 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 GNG2P59768 71 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 SRSF7Q16629 238 aaKnown RBP eCLIP7.52□□□□□ -1.213e-8■■■□□ 14.9
NPLOC4-219ENST00000576713 PNLIPRP3Q17RR3 467 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 TMEM69Q5SWH9 247 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 C12orf54Q6X4T0 127 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 GLDNQ6ZMI3 551 aaPredicted RBP7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 OR8H3Q8N146 312 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 DRAXINQ8NBI3 349 aaPredicted RBP7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 OR2AK2Q8NG84 335 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 S100A16Q96FQ6 103 aaKnown RBP7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 SLC25A33Q9BSK2 321 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 SLIRPQ9GZT3 109 aaKnown RBP7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 C16orf95Q9H693 158 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 PLSCR3Q9NRY6 295 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 SERTAD4Q9NUC0 356 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 ANXA10Q9UJ72 324 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 ANAPC10Q9UM13 185 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 NBEAL1Q6ZS30 2694 aa7.52□□□□□ -1.21
NPLOC4-219ENST00000576713 J3QRK9 145 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 HSPA12AO43301 675 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 LANCL1O43813 399 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 SCGNO76038 276 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 OR2F2O95006 317 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 IGLV2-14P01704 120 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 OR8U9P0C7N5 309 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 CT45A6P0DMU7 189 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 CT45A5P0DMU8 189 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 CT45A7P0DMV0 189 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 NFYAP23511 347 aaPredicted RBP7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 KIR2DS4P43632 304 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 F2RL1P55085 397 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 RPL15P61313 204 aaKnown RBP7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 MRPS15P82914 257 aaKnown RBP7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 EBI3Q14213 229 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms