RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 WIPF2Q8TF74 440 aaPredicted RBP12.07□□□□□ -0.48
SMG6-220ENST00000576218 ABHD5Q8WTS1 349 aa12.07□□□□□ -0.48
SMG6-220ENST00000576218 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMG6-220ENST00000576218 ELF5Q9UKW6 265 aaPredicted RBP12.07□□□□□ -0.48
SMG6-220ENST00000576218 TRBV6-7A0A0A0MS04 114 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 RBBP9O75884 186 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 DIRAS3O95661 229 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 CT45A6P0DMU7 189 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 CT45A5P0DMU8 189 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 CT45A7P0DMV0 189 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 ARPC4P59998 168 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 CD83Q01151 205 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 PNLIPRP3Q17RR3 467 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 FAM71E2Q8N5Q1 922 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 COMMD1Q8N668 190 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 AGMATQ9BSE5 352 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 FUNDC2Q9BWH2 189 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 DCSTAMPQ9H295 470 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 PARP11Q9NR21 331 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 PLSCR3Q9NRY6 295 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 SPATA2Q9UM82 520 aa12.06□□□□□ -0.48
SMG6-220ENST00000576218 A0A0A6YYH2 397 aa12.05□□□□□ -0.48
SMG6-220ENST00000576218 A6NJ64 397 aa12.05□□□□□ -0.48
SMG6-220ENST00000576218 H0YJW9 148 aa12.05□□□□□ -0.48
SMG6-220ENST00000576218 J3QRK9 145 aa12.05□□□□□ -0.48
SMG6-220ENST00000576218 CTXN2P0C2S0 81 aa12.05□□□□□ -0.48
SMG6-220ENST00000576218 CNTFRP26992 372 aa12.05□□□□□ -0.48
SMG6-220ENST00000576218 RPS16P62249 146 aaKnown RBP12.05□□□□□ -0.48
SMG6-220ENST00000576218 SRSF7Q16629 238 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMG6-220ENST00000576218 ZNF260Q3ZCT1 412 aa12.05□□□□□ -0.48
SMG6-220ENST00000576218 LIN54Q6MZP7 749 aa12.05□□□□□ -0.48
SMG6-220ENST00000576218 TEX38Q6PEX7 206 aa12.05□□□□□ -0.48
SMG6-220ENST00000576218 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.05□□□□□ -0.48
SMG6-220ENST00000576218 SLC25A38Q96DW6 304 aa12.05□□□□□ -0.48
SMG6-220ENST00000576218 S100A16Q96FQ6 103 aaKnown RBP12.05□□□□□ -0.48
SMG6-220ENST00000576218 HSPB9Q9BQS6 159 aa12.05□□□□□ -0.48
SMG6-220ENST00000576218 TRRAPQ9Y4A5 3859 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 LINC01548A6NM66 108 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 OR5H8P0DN80 308 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 CD33P20138 364 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 RPS19P39019 145 aaKnown RBP12.04□□□□□ -0.48
SMG6-220ENST00000576218 VBP1P61758 197 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 DEFA6Q01524 100 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 C5orf64Q2M2E5 130 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 CXorf66Q5JRM2 361 aaPredicted RBP12.04□□□□□ -0.48
SMG6-220ENST00000576218 UBE2NLQ5JXB2 153 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 Q6ZS49 121 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 PDPNQ86YL7 162 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 C1QL4Q86Z23 238 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 SAMD12Q8N8I0 201 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 RITA1Q96K30 269 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 TSNAXQ99598 290 aaKnown RBP12.04□□□□□ -0.48
SMG6-220ENST00000576218 IFT46Q9NQC8 304 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 SLC35D1Q9NTN3 355 aa12.04□□□□□ -0.48
SMG6-220ENST00000576218 HLA-DRB1P01911 266 aa12.03□□□□□ -0.48
SMG6-220ENST00000576218 NCS1P62166 190 aa12.03□□□□□ -0.48
SMG6-220ENST00000576218 RTL8BQ17RB0 113 aa12.03□□□□□ -0.48
SMG6-220ENST00000576218 TCTEX1D4Q5JR98 221 aa12.03□□□□□ -0.48
SMG6-220ENST00000576218 TMEM69Q5SWH9 247 aa12.03□□□□□ -0.48
SMG6-220ENST00000576218 H1FOOQ8IZA3 346 aaPredicted RBP12.03□□□□□ -0.48
SMG6-220ENST00000576218 KLHL30-AS1Q8NEE0 82 aa12.03□□□□□ -0.48
SMG6-220ENST00000576218 OR5AN1Q8NGI8 311 aa12.03□□□□□ -0.48
SMG6-220ENST00000576218 OR13F1Q8NGS4 319 aa12.03□□□□□ -0.48
SMG6-220ENST00000576218 FLYWCH2Q96CP2 140 aaKnown RBP12.03□□□□□ -0.48
SMG6-220ENST00000576218 MRPS26Q9BYN8 205 aaKnown RBP12.03□□□□□ -0.48
SMG6-220ENST00000576218 FBXL15Q9H469 300 aa12.03□□□□□ -0.48
SMG6-220ENST00000576218 METTL1Q9UBP6 276 aaKnown RBP12.03□□□□□ -0.48
SMG6-220ENST00000576218 ANXA10Q9UJ72 324 aa12.03□□□□□ -0.48
SMG6-220ENST00000576218 VWFP04275 2813 aa12.03□□□□□ -0.48
SMG6-220ENST00000576218 IGKV1D-8A0A087WSZ0 117 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 ADARB2-AS1A8MUL3 147 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 RRHO14718 337 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 NFYAP23511 347 aaPredicted RBP12.02□□□□□ -0.49
SMG6-220ENST00000576218 LUMP51884 338 aaPredicted RBP12.02□□□□□ -0.49
SMG6-220ENST00000576218 RPL23AP62750 156 aaKnown RBP12.02□□□□□ -0.49
SMG6-220ENST00000576218 ECSCRQ19T08 205 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 CNIH2Q6PI25 160 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 TMEM65Q6PI78 240 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 ZNF383Q8NA42 475 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 BEST4Q8NFU0 473 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 NPBQ8NG41 125 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 SLC25A46Q96AG3 418 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 CLCC1Q96S66 551 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 TOLLIPQ9H0E2 274 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 OR51J1Q9H342 316 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 SDHAF2Q9NX18 166 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 A3GALT2U3KPV4 340 aa12.02□□□□□ -0.49
SMG6-220ENST00000576218 TRIM64CA6NLI5 447 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 ATP6V0E1O15342 81 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 SSX5O60225 188 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 NDUFA3O95167 84 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 FCER2P06734 321 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 CBX5P45973 191 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 THBS3P49746 956 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 GPR141Q7Z602 305 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 KCTD12Q96CX2 325 aaKnown RBP12.01□□□□□ -0.49
SMG6-220ENST00000576218 ADTRPQ96IZ2 230 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 HARBI1Q96MB7 349 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 RNF5Q99942 180 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 AUNIPQ9H7T9 357 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms