RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 GHRLQ9UBU3 117 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 RPL36Q9Y3U8 105 aaKnown RBP6.81□□□□□ -1.32
SMG6-218ENST00000575454 IZUMO1RA6ND01 250 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 ST8SIA5O15466 376 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 APOA2P02652 100 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 MGMTP16455 207 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 IGFBP3P17936 291 aaPredicted RBP6.8□□□□□ -1.32
SMG6-218ENST00000575454 FSTP19883 344 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 ALDH3A2P51648 485 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 GTF2A1P52655 376 aaPredicted RBP6.8□□□□□ -1.32
SMG6-218ENST00000575454 RPS16P62249 146 aaKnown RBP6.8□□□□□ -1.32
SMG6-218ENST00000575454 HMGN3Q15651 99 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 CD300EQ496F6 205 aaPredicted RBP6.8□□□□□ -1.32
SMG6-218ENST00000575454 RPL39P5Q59GN2 51 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 AWAT2Q6E213 333 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 CEMP1Q6PRD7 247 aaPredicted RBP6.8□□□□□ -1.32
SMG6-218ENST00000575454 PDPNQ86YL7 162 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 BVESQ8NE79 360 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 DYNLRB2Q8TF09 96 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 EDARADDQ8WWZ3 215 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 MUL1Q969V5 352 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 Q96M66 194 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 NEDD4LQ96PU5 975 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 OR14A2Q96R54 314 aa6.8□□□□□ -1.32
SMG6-218ENST00000575454 MRPS18AQ9NVS2 196 aaKnown RBP6.8□□□□□ -1.32
SMG6-218ENST00000575454 TECRQ9NZ01 308 aaKnown RBP6.8□□□□□ -1.32
SMG6-218ENST00000575454 KMT2AQ03164 3969 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 ZNF785A8K8V0 405 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 BAG2O95816 211 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 ALPLP05186 524 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 ATF4P18848 351 aaPredicted RBP6.79□□□□□ -1.32
SMG6-218ENST00000575454 MAP2K4P45985 399 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 DYRK1AQ13627 763 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 PMS2P11Q13670 270 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 GUCA2BQ16661 112 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 Q499Y3 187 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 YIF1BQ5BJH7 314 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 GLDNQ6ZMI3 551 aaPredicted RBP6.79□□□□□ -1.32
SMG6-218ENST00000575454 MOB1BQ7L9L4 216 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 TMEM217Q8N7C4 229 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 OR52I1Q8NGK6 324 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 RHOXF1Q8NHV9 184 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 THRSPQ92748 146 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 SMIM19Q96E16 107 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 AGMATQ9BSE5 352 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 GGTLC1Q9BX51 225 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 RIMS4Q9H426 269 aaPredicted RBP6.79□□□□□ -1.32
SMG6-218ENST00000575454 BANF2Q9H503 90 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 BABAM2Q9NXR7 383 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 COA4Q9NYJ1 87 aa6.79□□□□□ -1.32
SMG6-218ENST00000575454 LOC102724200A0A096LPH7 203 aaPredicted RBP6.78□□□□□ -1.32
SMG6-218ENST00000575454 TRBV5-5A0A0J9YX44 114 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 SAC3D1A6NKF1 404 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 FAM223BA6NKX1 122 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 OGG1O15527 345 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 TUSC2O75896 110 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 IGKV1-16P04430 117 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 CD7P09564 240 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 LIMS3P0CW19 117 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 LIMS4P0CW20 117 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 GABRB1P18505 474 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 ZBTB25P24278 435 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 DCKP27707 260 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 KIR2DS2P43631 304 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 TAGLNQ01995 201 aaKnown RBP6.78□□□□□ -1.32
SMG6-218ENST00000575454 CBX3Q13185 183 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 DEFB114Q30KQ6 69 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 ANKRD55Q3KP44 614 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 SIGIRRQ6IA17 410 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 FAM223AQ8IWN6 122 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 FAM46BQ96A09 425 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 PTX4Q96A99 478 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 SLC7A6OSQ96CW6 309 aaPredicted RBP6.78□□□□□ -1.32
SMG6-218ENST00000575454 ABHD14BQ96IU4 210 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 OVOL2Q9BRP0 275 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 UQCC2Q9BRT2 126 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 CHMP1AQ9HD42 196 aaPredicted RBP6.78□□□□□ -1.32
SMG6-218ENST00000575454 AMBNQ9NP70 447 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 ZC4H2Q9NQZ6 224 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 ZNF221Q9UK13 617 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 MGAT4AQ9UM21 535 aa6.78□□□□□ -1.32
SMG6-218ENST00000575454 IRGMA1A4Y4 181 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 H3BNX3 289 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 TRBV12-3P01733 135 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 UBBP0CG47 229 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 BMI1P35226 326 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 CEACAM6P40199 344 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 ATP5G2Q06055 141 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 TNFRSF9Q07011 255 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 C1orf146Q5VVC0 180 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 GLT8D1Q68CQ7 371 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 LGALS9CQ6DKI2 356 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 SVOPQ8N4V2 548 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 NKAIN3Q8N8D7 197 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 GATAD1Q8WUU5 269 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 PHB2Q99623 299 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 SLC29A1Q99808 456 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 C11orf54Q9H0W9 315 aaPredicted RBP6.77□□□□□ -1.33
SMG6-218ENST00000575454 TP53TG1Q9Y2A0 90 aa6.77□□□□□ -1.33
SMG6-218ENST00000575454 TRAV8-7A0A075B6U6 113 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms