RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 RNF212BA8MTL3 300 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 TUBG1P23258 451 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 PSMB3P49720 205 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 CLEC12BQ2HXU8 276 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 Q8IYB0 196 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 WDYHV1Q96HA8 205 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 ELOVL1Q9BW60 279 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 OR2J1Q9GZK6 312 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 MUC3AQ02505 3323 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 CTXND1A0A1B0GTU2 59 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 SH2D1BO14796 132 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 SELLP14151 372 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 ZNF808Q8N4W9 903 aaPredicted RBP16.02■□□□□ 0.16
SCARF1-206ENST00000573852 ZNF645Q8N7E2 425 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 OR10G9Q8NGN4 311 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 OR10G7Q8NGN6 311 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 GPR87Q9BY21 358 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 OR2D2Q9H210 308 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 POLDIP2Q9Y2S7 368 aa16.02■□□□□ 0.16
SCARF1-206ENST00000573852 ODAMA1E959 279 aa16.02■□□□□ 0.15
SCARF1-206ENST00000573852 PMS2P5A8MQ11 134 aa16.02■□□□□ 0.15
SCARF1-206ENST00000573852 C9orf172C9J069 976 aa16.02■□□□□ 0.15
SCARF1-206ENST00000573852 ACP1P24666 158 aa16.02■□□□□ 0.15
SCARF1-206ENST00000573852 GALR1P47211 349 aa16.02■□□□□ 0.15
SCARF1-206ENST00000573852 BRWD1-AS2P59051 145 aa16.02■□□□□ 0.15
SCARF1-206ENST00000573852 PKIAP61925 76 aa16.02■□□□□ 0.15
SCARF1-206ENST00000573852 TFF3Q07654 80 aa16.02■□□□□ 0.15
SCARF1-206ENST00000573852 CACNA1DQ01668 2161 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 TNRC18O15417 2968 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-206ENST00000573852 LRRC30A6NM36 301 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 TMEM250H0YL14 139 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 PSPNO60542 156 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 FGF7P21781 194 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 OR3A1P47881 315 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 OR4F5Q8NH21 305 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 ZDHHC16Q969W1 377 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 OR4F4Q96R69 305 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 A0A1B0GV90 55 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 H7BYZ3 331 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 S1PR2O95136 353 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 AMBPP02760 352 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 GRPP07492 148 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 HOXA4Q00056 320 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-206ENST00000573852 FFAR4Q5NUL3 377 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 FBXW9Q5XUX1 488 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 OR52L2PQ8NGH6 319 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 IER2Q9BTL4 223 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 TMEM147Q9BVK8 224 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 FOXJ2Q9P0K8 574 aa16.01■□□□□ 0.15
SCARF1-206ENST00000573852 C12orf77C9JDV5 145 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 ZG16O60844 167 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 DEFA4P12838 97 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 DDTP30046 118 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 EIF4EBP1Q13541 118 aaPredicted RBP16■□□□□ 0.15
SCARF1-206ENST00000573852 MSMO1Q15800 293 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 OR1P1Q8NH06 330 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 PCGF1Q9BSM1 259 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 C17orf98A8MV24 154 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 SMPD2O60906 423 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 PPP1CBP62140 327 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 P2RY6Q15077 328 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 ATP6V1FQ16864 119 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 TBC1D28Q2M2D7 210 aa16■□□□□ 0.15
SCARF1-206ENST00000573852 CTNNBIP1Q9NSA3 81 aaPredicted RBP16■□□□□ 0.15
SCARF1-206ENST00000573852 HAND1O96004 215 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 MEOX1P50221 254 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 PMP22Q01453 160 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 LPAL2Q16609 132 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 DCAF10Q5QP82 559 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 UBALD2Q8IYN6 164 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 OR5R1Q8NH85 324 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 NANOS1Q8WY41 292 aaKnown RBP15.99■□□□□ 0.15
SCARF1-206ENST00000573852 RAB24Q969Q5 203 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 KCNIP1Q9NZI2 227 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 BTNL3Q6UXE8 466 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 REC114Q7Z4M0 266 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 TGIF2LYQ8IUE0 185 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 DTD1Q8TEA8 209 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 GALMQ96C23 342 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 OR5B12Q96R08 314 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 ZPBPQ9BS86 351 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 ABI3Q9P2A4 366 aa15.99■□□□□ 0.15
SCARF1-206ENST00000573852 JOSD1Q15040 202 aaPredicted RBP15.98■□□□□ 0.15
SCARF1-206ENST00000573852 SPINK9Q5DT21 86 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 OR10P1Q8NGE3 313 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 MEGF10Q96KG7 1140 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 URB1O60287 2271 aaKnown RBP15.98■□□□□ 0.15
SCARF1-206ENST00000573852 A0A087X0M5 115 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 A0A1B0GX30 115 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 XKRY2A2RUG3 117 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 PPP5D1E7EU14 171 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 TSTD3H0UI37 97 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 WNT9BO14905 357 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 PAGE4O60829 102 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 GZMBP10144 247 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 LINC00205P59089 165 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 ZNF766Q5HY98 468 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 ZNF66Q6ZN08 573 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 ZBTB34Q8NCN2 500 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 NPCDR1Q9BY65 106 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms