RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 TRBV6-6A0A0A6YYG2 114 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 TRAV1-2A0A0B4J238 106 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 PDCD5O14737 125 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 DENRO43583 198 aaKnown RBP5.86□□□□□ -1.47
NUP88-205ENST00000572809 MRPS14O60783 128 aaKnown RBP5.86□□□□□ -1.47
NUP88-205ENST00000572809 NAPSAO96009 420 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 F2RL1P55085 397 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 CLDN12P56749 244 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 SLC35B1P78383 322 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 GNMTQ14749 295 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 HMGN3Q15651 99 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 SSX1Q16384 188 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 ZNF367Q7RTV3 350 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 ODF3L1Q8IXM7 274 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 STPG2Q8N412 459 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 OR2AK2Q8NG84 335 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 RBMXL1Q96E39 390 aaKnown RBP5.86□□□□□ -1.47
NUP88-205ENST00000572809 GPHA2Q96T91 129 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 ABHD14AQ9BUJ0 271 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 GON7Q9BXV9 100 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 PECRQ9BY49 303 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 ZFP57Q9NU63 452 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 AK3Q9UIJ7 227 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 MGAT4AQ9UM21 535 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 NOTCH1P46531 2555 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 PLXNB1O43157 2135 aa5.86□□□□□ -1.47
NUP88-205ENST00000572809 TRDV1A0A1B0GX56 115 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 FOXI3A8MTJ6 420 aaPredicted RBP5.85□□□□□ -1.47
NUP88-205ENST00000572809 AP4M1O00189 453 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 LDLRAD4O15165 306 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 ZBTB25P24278 435 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 SOX6P35712 828 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 CEACAM6P40199 344 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 GPR12P47775 334 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 GABARAPL2P60520 117 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 PNLIPRP3Q17RR3 467 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 RNF151Q2KHN1 245 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 KPRPQ5T749 579 aaPredicted RBP5.85□□□□□ -1.47
NUP88-205ENST00000572809 HES5Q5TA89 166 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 TEX38Q6PEX7 206 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 CD200R1LQ6Q8B3 271 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 ZNF833PQ6ZTB9 187 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 COMMD1Q8N668 190 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 OR56B1Q8NGI3 324 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 ARHGAP5-AS1Q96IT6 56 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 RITA1Q96K30 269 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 NABP2Q9BQ15 211 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 CMSS1Q9BQ75 279 aaKnown RBP5.85□□□□□ -1.47
NUP88-205ENST00000572809 HDHD3Q9BSH5 251 aaPredicted RBP5.85□□□□□ -1.47
NUP88-205ENST00000572809 YTHDF1Q9BYJ9 559 aaKnown RBP5.85□□□□□ -1.47
NUP88-205ENST00000572809 GHITMQ9H3K2 345 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 Q9H521 79 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 Q9N2K0 584 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 PIPOXQ9P0Z9 390 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 RAB22AQ9UL26 194 aa5.85□□□□□ -1.47
NUP88-205ENST00000572809 SAA2-SAA4A0A096LPE2 208 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 TMEM272A0A1B0GTI8 110 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 IFITM5A6NNB3 132 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 ITGB1BP1O14713 200 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 RAB29O14966 203 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 HSPA12AO43301 675 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 RRP9O43818 475 aaKnown RBP5.84□□□□□ -1.47
NUP88-205ENST00000572809 PRB2P02812 416 aaPredicted RBP5.84□□□□□ -1.47
NUP88-205ENST00000572809 SCTP09683 121 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 SAA2P0DJI9 122 aaPredicted RBP5.84□□□□□ -1.47
NUP88-205ENST00000572809 IGLL1P15814 213 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 RAB3BP20337 219 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 GALP22466 123 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 MYL9P24844 172 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 OR3A3P47888 321 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 SLURP1P55000 103 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 OR10A3P58181 314 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 ACTBP60709 375 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 RPL23AP62750 156 aaKnown RBP5.84□□□□□ -1.47
NUP88-205ENST00000572809 MRPS15P82914 257 aaKnown RBP5.84□□□□□ -1.47
NUP88-205ENST00000572809 MMDQ15546 238 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 PLAC9Q5JTB6 97 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 FAM209BQ5JX69 171 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 UBE2UQ5VVX9 321 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 Q6ZPA2 131 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 MOB1BQ7L9L4 216 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 SPARTQ8N0X7 666 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 FAM71E2Q8N5Q1 922 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 OR2C3Q8N628 320 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 PHF21AQ96BD5 680 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 RAB3CQ96E17 227 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 ABHD14BQ96IU4 210 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 ZNF251Q9BRH9 671 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 C1orf43Q9BWL3 253 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 MRPL20Q9BYC9 149 aaKnown RBP5.84□□□□□ -1.47
NUP88-205ENST00000572809 IFI27L2Q9H2X8 130 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 NDUFB11Q9NX14 153 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 SLC23A1Q9UHI7 598 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 CMYA5Q8N3K9 4069 aa5.84□□□□□ -1.47
NUP88-205ENST00000572809 METTL21EPA6NDL7 271 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 TRDCB7Z8K6 153 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 DUS4LO95620 317 aaKnown RBP5.83□□□□□ -1.48
NUP88-205ENST00000572809 IGF1P05019 195 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 ELANEP08246 267 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 CD3GP09693 182 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms