RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 C1orf195Q5TG92 126 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 HES3Q5TGS1 186 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 TEX36Q5VZQ5 186 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 B3GNTL1Q67FW5 361 aaPredicted RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 ZFAND6Q6FIF0 208 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 SPSB3Q6PJ21 355 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 TEX261Q6UWH6 196 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 Q6ZRG5 221 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 LINC01551Q86U37 167 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 GLCCI1Q86VQ1 547 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 BEST3Q8N1M1 668 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 C9orf62Q8N4C0 152 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 C15orf54Q8N8G6 183 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 DEFB124Q8NES8 71 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 OR10G4Q8NGN3 311 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 OR4K13Q8NH42 304 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 ZNF563Q8TA94 476 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 GPR119Q8TDV5 335 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 ASB13Q8WXK3 278 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 RDH5Q92781 318 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 REEP6Q96HR9 211 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 DIRAS2Q96HU8 199 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 IMMP1LQ96LU5 166 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 Q96M85 177 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 ERMAPQ96PL5 475 aaPredicted RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 PDCD1LG2Q9BQ51 273 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 SOSTQ9BQB4 213 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 C20orf144Q9BQM9 153 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 ZNF649Q9BS31 505 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 MARVELD1Q9BSK0 173 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 URM1Q9BTM9 101 aaKnown RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 FAAP24Q9BTP7 215 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 CABLES2Q9BTV7 478 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 MLST8Q9BVC4 326 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 SPRY4Q9C004 299 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 NPFFR1Q9GZQ6 430 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 OR51E2Q9H255 320 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 OR51J1Q9H342 316 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 PPDPFQ9H3Y8 114 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 ZNF442Q9H7R0 627 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 PROK2Q9HC23 129 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 B3GAT2Q9NPZ5 323 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 TMEM9BQ9NQ34 198 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 UBQLN4Q9NRR5 601 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 C14orf105Q9NVL8 296 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 COMMD9Q9P000 198 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 METTL1Q9UBP6 276 aaKnown RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 RPS6KB2Q9UBS0 482 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 ZNF230Q9UIE0 474 aaPredicted RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 HSPB8Q9UJY1 196 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 FBXL2Q9UKC9 423 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 VDAC3Q9Y277 283 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 LSM2Q9Y333 95 aaKnown RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 IER3IP1Q9Y5U9 82 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 SPIN1Q9Y657 262 aaPredicted RBP2.98□□□□□ -1.93
SMG6-208ENST00000570874 WDFY3Q8IZQ1 3526 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 AHCTF1Q8WYP5 2266 aa2.98□□□□□ -1.93
SMG6-208ENST00000570874 FREM2Q5SZK8 3169 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 MEIKINA0A087WXM9 373 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 TMED7-TICAM2A0A0A6YYA0 188 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 LOC101059948A0A1B0GTJ6 334 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 A0A1W2PQD3 144 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 MED19A0JLT2 244 aaPredicted RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 PINLYPA6NC86 204 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 OR5H1A6NKK0 313 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 CEACAM18A8MTB9 384 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 A8MVM7 634 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 PRR32B1ATL7 298 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 C11orf98E9PRG8 122 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 H7C417 338 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 CCL24O00175 119 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 MFNGO00587 321 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 HSPB6O14558 160 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 TNFRSF13BO14836 293 aaPredicted RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 HMGB3O15347 200 aaKnown RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 MLNRO43193 412 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 GPR137BO60478 399 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 ZIC3O60481 467 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 SCO1O75880 301 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 ZFAND5O76080 213 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 CDS2O95674 445 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 CD8AP01732 235 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 APOA2P02652 100 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 ASAH2BP0C7U1 165 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 UBBP0CG47 229 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 CCL3P10147 92 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 SLC2A2P11168 524 aaPredicted RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 GP1BBP13224 206 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 HLA-DOBP13765 273 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 CD99P14209 185 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 TCN2P20062 427 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 USF1P22415 310 aaPredicted RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 FOLR3P41439 243 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 CDKN2AP42771 156 aaKnown RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 NR4A2P43354 598 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 MAP2K3P46734 347 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 P2RX1P51575 399 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 DLX1P56177 255 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 RAB5BP61020 215 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 RPS25P62851 125 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms