RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 VCX3AQ9NNX9 186 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 RHBDL2Q9NX52 303 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 ZNF107Q9UII5 783 aaPredicted RBP10.25□□□□□ -0.77
CNOT1-220ENST00000569916 RNF150Q9ULK6 438 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 TMEM235A6NFC5 223 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 SCGNO76038 276 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 HLA-DRB1P01911 266 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 IGF1P05019 195 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 GSTP1P09211 210 aaKnown RBP10.24□□□□□ -0.77
CNOT1-220ENST00000569916 TALDO1P37837 337 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 RPL23AP62750 156 aaKnown RBP10.24□□□□□ -0.77
CNOT1-220ENST00000569916 CFHR3Q02985 330 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 C5orf64Q2M2E5 130 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 BEAN1Q3B7T3 259 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 ZNF260Q3ZCT1 412 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 IDNKQ5T6J7 187 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 COMMD1Q8N668 190 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 DRAXINQ8NBI3 349 aaPredicted RBP10.24□□□□□ -0.77
CNOT1-220ENST00000569916 OR10J5Q8NHC4 309 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 NUDCD2Q8WVJ2 157 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 OR2D2Q9H210 308 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 ZNF221Q9UK13 617 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 ZNF580Q9UK33 172 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 WASHC3Q9Y3C0 194 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 ETV7Q9Y603 341 aa10.24□□□□□ -0.77
CNOT1-220ENST00000569916 IGHV7-81A0A0B4J1V7 117 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 AIREO43918 545 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 SSX5O60225 188 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 PF4P02776 101 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 MC5RP33032 325 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 LINC00205P59089 165 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 PNLIPRP3Q17RR3 467 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 PDLIM3Q53GG5 364 aaPredicted RBP10.23□□□□□ -0.77
CNOT1-220ENST00000569916 KPRPQ5T749 579 aaPredicted RBP10.23□□□□□ -0.77
CNOT1-220ENST00000569916 ETV3LQ6ZN32 361 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 C18orf65Q6ZTR6 163 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 H1FOOQ8IZA3 346 aaPredicted RBP10.23□□□□□ -0.77
CNOT1-220ENST00000569916 ZNF383Q8NA42 475 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.23□□□□□ -0.77
CNOT1-220ENST00000569916 C5orf30Q96GV9 206 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 GON7Q9BXV9 100 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 KIAA1456Q9P272 454 aa10.23□□□□□ -0.77
CNOT1-220ENST00000569916 H7C2Y5 167 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 M0R1X1 148 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 RRHO14718 337 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 ATP6V0E1O15342 81 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 RBBP9O75884 186 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 RPLP1P05386 114 aaKnown RBP10.22□□□□□ -0.77
CNOT1-220ENST00000569916 TFAP2AP05549 437 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 OR8U9P0C7N5 309 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 VDAC1P21796 283 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 PITPNAQ00169 270 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 NDPQ00604 133 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 OXLD1Q5BKU9 147 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 LIN54Q6MZP7 749 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 TEX38Q6PEX7 206 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 RNF152Q8N8N0 203 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 WFDC9Q8NEX5 89 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 OR8U1Q8NH10 309 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 GINS4Q9BRT9 223 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 DCSTAMPQ9H295 470 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 OR51J1Q9H342 316 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 FBXL15Q9H469 300 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 ZFP57Q9NU63 452 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 SDHAF2Q9NX18 166 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 SPATA2Q9UM82 520 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 GAB2Q9UQC2 676 aa10.22□□□□□ -0.77
CNOT1-220ENST00000569916 A0A0A6YYH2 397 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 A6NJ64 397 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 TMEM127O75204 238 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 IGHG4P01861 327 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 IGKV1-16P04430 117 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 CD33P20138 364 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 GNG2P59768 71 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 LSM3P62310 102 aaKnown RBP10.21□□□□□ -0.77
CNOT1-220ENST00000569916 FOXE3Q13461 319 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 LCNL1Q6ZST4 164 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 C8orf86Q6ZUL3 223 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 PDPNQ86YL7 162 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 KLHL30-AS1Q8NEE0 82 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 RNF5Q99942 180 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 ST6GALNAC5Q9BVH7 336 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 PARP11Q9NR21 331 aa10.21□□□□□ -0.77
CNOT1-220ENST00000569916 TRAV18A0A075B6X5 111 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 NUDT19A8MXV4 375 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 G3V318 75 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 APOA2P02652 100 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 ELANEP08246 267 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 SMIM18P0DKX4 95 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 PSMB8P28062 276 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 PPIFP30405 207 aaKnown RBP10.2□□□□□ -0.78
CNOT1-220ENST00000569916 SLC6A1P30531 599 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 RPS19P39019 145 aaKnown RBP10.2□□□□□ -0.78
CNOT1-220ENST00000569916 THBS3P49746 956 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 PRKDCP78527 4128 aaKnown RBP10.2□□□□□ -0.78
CNOT1-220ENST00000569916 CXorf66Q5JRM2 361 aaPredicted RBP10.2□□□□□ -0.78
CNOT1-220ENST00000569916 CROCCP3Q8IVE0 287 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 LINC00482Q8N8I6 264 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 FUNDC2Q9BWH2 189 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 SLC35D1Q9NTN3 355 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms