RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ZNF485Q8NCK3 441 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 OR9G4Q8NGQ1 327 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 C9orf16Q9BUW7 83 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 KRTAP17-1Q9BYP8 105 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 TUBA4BQ9H853 241 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 PIPOXQ9P0Z9 390 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 ABRACLQ9P1F3 81 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 DIMT1Q9UNQ2 313 aaKnown RBP9.19□□□□□ -0.94
CAPN3-220ENST00000569827 EXOSC1Q9Y3B2 195 aaKnown RBP9.19□□□□□ -0.94
CAPN3-220ENST00000569827 A8MZ25 164 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 RAB29O14966 203 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 PROP1O75360 226 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 ATP5HO75947 161 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 TFAP2AP05549 437 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 CPEP16870 476 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 EDN2P20800 178 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 HTR2CP28335 458 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 RPS16P62249 146 aaKnown RBP9.18□□□□□ -0.94
CAPN3-220ENST00000569827 FXYD3Q14802 87 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 AKIRIN2Q53H80 203 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 ZNF383Q8NA42 475 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 POC5Q8NA72 575 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 OR5AN1Q8NGI8 311 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 NEDD4LQ96PU5 975 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 THAP7Q9BT49 309 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-220ENST00000569827 C11orf54Q9H0W9 315 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-220ENST00000569827 RANGRFQ9HD47 186 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-220ENST00000569827 CHCHD3Q9NX63 227 aaKnown RBP9.18□□□□□ -0.94
CAPN3-220ENST00000569827 KMT2AQ03164 3969 aa9.18□□□□□ -0.94
CAPN3-220ENST00000569827 JTBO76095 146 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 IFNA6P05013 189 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 GLAP06280 429 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 CELP19835 753 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 CD40LGP29965 261 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 UNC119Q13432 240 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 KLF5Q13887 457 aaPredicted RBP9.17□□□□□ -0.94
CAPN3-220ENST00000569827 LY6G6FQ5SQ64 297 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 FAM71F2Q6NXP2 309 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 ZFP1Q6P2D0 407 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 ZNF554Q86TJ5 538 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 ZNF555Q8NEP9 628 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 GGHQ92820 318 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 TMEM80Q96HE8 168 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 SLA2Q9H6Q3 261 aa9.17□□□□□ -0.94
CAPN3-220ENST00000569827 SLC22A1O15245 554 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 CNIH1O95406 144 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 BRI3O95415 125 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 NAPSAO96009 420 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 CSN3P07498 182 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 SCTP09683 121 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 ZP3P21754 424 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 CEACAM6P40199 344 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 CD81P60033 236 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 RPS27AP62979 156 aaKnown RBP9.16□□□□□ -0.94
CAPN3-220ENST00000569827 HLA-DRB3P79483 266 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 ZNF880Q6PDB4 577 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 ZNF562Q6V9R5 426 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 GTSCR1Q86UQ5 136 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 PQLC1Q8N2U9 271 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 CYGBQ8WWM9 190 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 AGMATQ9BSE5 352 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 TMEM59Q9BXS4 323 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 HIPK2Q9H2X6 1198 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 SMPD3Q9NY59 655 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-220ENST00000569827 COA4Q9NYJ1 87 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 AK3Q9UIJ7 227 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 CEPT1Q9Y6K0 416 aa9.16□□□□□ -0.94
CAPN3-220ENST00000569827 M0R1X1 148 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 SOCS1O15524 211 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 RBBP9O75884 186 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 IGLV2-23P01705 113 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 PRH1P02810 166 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 CD7P09564 240 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 CD3GP09693 182 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 MC5RP33032 325 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 ST3GAL4Q11206 333 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 RBM48Q5RL73 367 aaKnown RBP9.15□□□□□ -0.94
CAPN3-220ENST00000569827 DEFB125Q8N687 156 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 NKAIN3Q8N8D7 197 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 BVESQ8NE79 360 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 TSNAXQ99598 290 aaKnown RBP9.15□□□□□ -0.94
CAPN3-220ENST00000569827 S100A14Q9HCY8 104 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 FAM53CQ9NYF3 392 aa9.15□□□□□ -0.94
CAPN3-220ENST00000569827 IGKV1-6A0A0C4DH72 117 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 IRGMA1A4Y4 181 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 RBMY1BA6NDE4 496 aaKnown RBP9.14□□□□□ -0.95
CAPN3-220ENST00000569827 RBMY1EA6NEQ0 496 aaKnown RBP9.14□□□□□ -0.95
CAPN3-220ENST00000569827 H0Y980 276 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 RBMY1DP0C7P1 496 aaKnown RBP9.14□□□□□ -0.95
CAPN3-220ENST00000569827 P2RY14Q15391 338 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 RPEL1Q2QD12 228 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 LCN12Q6JVE5 192 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 AHSA2Q719I0 299 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 LRRTM1Q86UE6 522 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 CDH26Q8IXH8 852 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 C5orf30Q96GV9 206 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 UQCC2Q9BRT2 126 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 SLC35D1Q9NTN3 355 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 PLEKHJ1Q9NW61 149 aa9.14□□□□□ -0.95
CAPN3-220ENST00000569827 PEF1Q9UBV8 284 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms