RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 A0A1W2PRE2 83 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 FOXI3A8MTJ6 420 aaPredicted RBP5.63□□□□□ -1.51
SMG1-217ENST00000569764 A8MXK9 166 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 MFNGO00587 321 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 RCC1P18754 421 aaPredicted RBP5.63□□□□□ -1.51
SMG1-217ENST00000569764 ALOX5APP20292 161 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 BRS3P32247 399 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 RHOBP62745 196 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 LRRC10Q5BKY1 277 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 DNLZQ5SXM8 178 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 PGLYRP3Q96LB9 341 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 RCHY1Q96PM5 261 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 ANAPC13Q9BS18 74 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 MYO18BQ8IUG5 2567 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 TNRC6BQ9UPQ9 1833 aaKnown RBP5.63□□□□□ -1.51
SMG1-217ENST00000569764 RPS10-NUDT3A0A1W2PQS6 291 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 FABP7O15540 132 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 EIF5AP63241 154 aaKnown RBP5.63□□□□□ -1.51
SMG1-217ENST00000569764 ZNF791Q3KP31 576 aaPredicted RBP5.63□□□□□ -1.51
SMG1-217ENST00000569764 WDR82Q6UXN9 313 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 OR13C8Q8NGS7 320 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 SGMS2Q8NHU3 365 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 ZNF502Q8TBZ5 544 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 ZNF721Q8TF20 911 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 PITX2Q99697 317 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 RCL1Q9Y2P8 373 aaKnown RBP5.63□□□□□ -1.51
SMG1-217ENST00000569764 DSPP15924 2871 aaKnown RBP5.63□□□□□ -1.51
SMG1-217ENST00000569764 ALPK2Q86TB3 2170 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 TRAV38-1A0A0B4J264 116 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 TNFRSF11BO00300 401 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 FCN1O00602 326 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 CHST1O43916 411 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 NEURL1O76050 574 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 PPIAL4GP0DN37 164 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 ACP2P11117 423 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 FSTP19883 344 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 HMGA2P52926 109 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 RPL31P62899 125 aaKnown RBP5.63□□□□□ -1.51
SMG1-217ENST00000569764 SNAI3Q3KNW1 292 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 EIF5AL1Q6IS14 154 aaKnown RBP5.63□□□□□ -1.51
SMG1-217ENST00000569764 ZNF773Q6PK81 442 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 ZNF524Q96C55 264 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 MBD6Q96DN6 1003 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 MS4A6AQ9H2W1 248 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 ZNF816-ZNF321PA0A0X1KG74 233 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 GXYLT2A0PJZ3 443 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 SOX14O95416 240 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 ETV6P41212 452 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 SLC35A2P78381 396 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 POU3F1Q03052 451 aaPredicted RBP5.63□□□□□ -1.51
SMG1-217ENST00000569764 TESK1Q15569 626 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 KLHDC1Q8N7A1 406 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 ORAOV1Q8WV07 137 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 Q96MF0 132 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 SAP30LQ9HAJ7 183 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 DOK5Q9P104 306 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 ENPP4Q9Y6X5 453 aa5.63□□□□□ -1.51
SMG1-217ENST00000569764 IGKV3D-11A0A0A0MRZ8 115 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 NDUFB3O43676 98 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 NDUFB2O95178 105 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 CD33P20138 364 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 PSMB9P28065 219 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 GABRA4P48169 554 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 XGP55808 180 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 NIT1Q86X76 327 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 ACBD7Q8N6N7 88 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 LINC01356Q8N9X3 169 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 ZNF555Q8NEP9 628 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 OR10G2Q8NGC3 310 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 MED9Q9NWA0 146 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 INSIG2Q9Y5U4 225 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.62□□□□□ -1.51
SMG1-217ENST00000569764 A0A1W2PRD5 423 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 C11orf98E9PRG8 122 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 SIRPB1O00241 398 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 SIX6O95475 246 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 H1F0P07305 194 aaKnown RBP5.62□□□□□ -1.51
SMG1-217ENST00000569764 PTH2RP49190 550 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 FOXF1Q12946 379 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 DUSP5Q16690 384 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 C2orf68Q2NKX9 166 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 OR4F5Q8NH21 305 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 GABARAPL3Q9BY60 117 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 OR51J1Q9H342 316 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 HES4Q9HCC6 221 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 LAMTOR2Q9Y2Q5 125 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 DSPPQ9NZW4 1301 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 PTPN13Q12923 2485 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 ZNF462Q96JM2 2506 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 OR4C46A6NHA9 309 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 C17orf51A8MQB3 221 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 RBFOX2O43251 390 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMG1-217ENST00000569764 CLDN1O95832 211 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 ZNF20P17024 532 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 CDX1P47902 265 aaPredicted RBP5.62□□□□□ -1.51
SMG1-217ENST00000569764 RHEBQ15382 184 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 LAMTOR1Q6IAA8 161 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 IQCF1Q8N6M8 205 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 GPR119Q8TDV5 335 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 RNF183Q96D59 192 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms