RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PARD6GQ9BYG4 376 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 MRPL37Q9BZE1 423 aaKnown RBP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 SMIM3Q9BZL3 60 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 PARP12Q9H0J9 701 aaKnown RBP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 FAM234AQ9H0X4 552 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 GCM1Q9NP62 436 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 RAB9BQ9NP90 201 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 UQCC1Q9NVA1 299 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 OR6C3Q9NZP0 311 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 LAMP3Q9UQV4 416 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 CARHSP1Q9Y2V2 147 aaKnown RBP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 RBM7Q9Y580 266 aaKnown RBP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 CEP295Q9C0D2 2601 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 URB1O60287 2271 aaKnown RBP4.47□□□□□ -1.69
SF3B3-213ENST00000569687 TRAV1-1A0A0B4J248 108 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 IGHV3-64DA0A0J9YX35 117 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 BTBD17A6NE02 478 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 ATP6V1G2-DDX39BF2Z307 99 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 WRBO00258 174 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 TNFRSF13BO14836 293 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-213ENST00000569687 RAB29O14966 203 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 SPRY3O43610 288 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 SSSCA1O60232 199 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 PROP1O75360 226 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 MED6O75586 246 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 CLDN14O95500 239 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 CLDN1O95832 211 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 MUC1P15941 1255 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-213ENST00000569687 BMP5P22003 454 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 CCKARP32238 428 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 GABRA2P47869 451 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 DVL1P1P54792 670 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-213ENST00000569687 RPL30P62888 115 aaKnown RBP4.47□□□□□ -1.69
SF3B3-213ENST00000569687 CATR1Q13166 79 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 ATP6V1FQ16864 119 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 TMEM30BQ3MIR4 351 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 MORN2Q502X0 79 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 MIDNQ504T8 468 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 SPRNQ5BIV9 151 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 CT83Q5H943 113 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 STUMQ69YW2 141 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 CLEC9AQ6UXN8 241 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 ZNF788Q6ZQV5 615 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 Q6ZS46 218 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 CENPVQ7Z7K6 275 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-213ENST00000569687 PRR18Q8N4B5 295 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 ITLN1Q8WWA0 313 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 C14orf79Q96F83 325 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 C5orf30Q96GV9 206 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 VKORC1Q9BQB6 163 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 MAGT1Q9H0U3 335 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 HRH4Q9H3N8 390 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 PRORYQ9H606 182 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 HSPB7Q9UBY9 170 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 CACNG5Q9UF02 275 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 JPT1Q9UK76 154 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 RNF150Q9ULK6 438 aa4.47□□□□□ -1.69
SF3B3-213ENST00000569687 ZZEF1O43149 2961 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 DSPP15924 2871 aaKnown RBP4.46□□□□□ -1.7
SF3B3-213ENST00000569687 INTS1Q8N201 2190 aaKnown RBP4.46□□□□□ -1.7
SF3B3-213ENST00000569687 KBTBD11-OT1A0A1B0GTJ5 212 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 LRRC30A6NM36 301 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 C17orf100A8MU93 164 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 C17orf98A8MV24 154 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 FAM157AC9JC47 383 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 DNASE2O00115 360 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-213ENST00000569687 PPIHO43447 177 aaKnown RBP4.46□□□□□ -1.7
SF3B3-213ENST00000569687 SCO1O75880 301 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 TSPAN15O95858 294 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 APOC3P02656 99 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 H2AFB1P0C5Y9 115 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 TNFRSF1AP19438 455 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 ATP6V0CP27449 155 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 DUTP33316 252 aaKnown RBP4.46□□□□□ -1.7
SF3B3-213ENST00000569687 PPP1CCP36873 323 aaKnown RBP4.46□□□□□ -1.7
SF3B3-213ENST00000569687 SNCAP37840 140 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 RAB7AP51149 207 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 DYNLT3P51808 116 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 UBE2KP61086 200 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 SRSF3P84103 164 aaKnown RBP4.46□□□□□ -1.7
SF3B3-213ENST00000569687 TNFAIP6P98066 277 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-213ENST00000569687 MEF2CQ06413 473 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-213ENST00000569687 TNFRSF9Q07011 255 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 BTN1A1Q13410 526 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 PMS2P11Q13670 270 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF273Q14593 569 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 PEA15Q15121 130 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 ADIPOQQ15848 244 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 C17orf58Q2M2W7 97 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 FBXL19-AS1Q494R0 122 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 PDLIM3Q53GG5 364 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-213ENST00000569687 ATRAIDQ6UW56 229 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 TMEM14EPQ6UXP3 125 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 Q6ZRG5 221 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 STX12Q86Y82 276 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 SVBPQ8N300 66 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-213ENST00000569687 LFNGQ8NES3 379 aa4.46□□□□□ -1.7
SF3B3-213ENST00000569687 OR10A7Q8NGE5 316 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms