RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 ZNF383Q8NA42 475 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 EDARADDQ8WWZ3 215 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 CMSS1Q9BQ75 279 aaKnown RBP6.1□□□□□ -1.43
CDH3-209ENST00000569080 GON7Q9BXV9 100 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 KLK15Q9H2R5 256 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 OR51J1Q9H342 316 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 RAB22AQ9UL26 194 aa6.1□□□□□ -1.43
CDH3-209ENST00000569080 RYR3Q15413 4870 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 IGKV1D-8A0A087WSZ0 117 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 WI2-2373I1.2A0A1W2PRP0 233 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 SMIM30A4D0T7 59 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 TRDCB7Z8K6 153 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 CCL24O00175 119 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 RRHO14718 337 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 PDCD5O14737 125 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 FABP7O15540 132 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 DIRAS3O95661 229 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 IGKV1-16P04430 117 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 CD3GP09693 182 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 OR5H8P0DN80 308 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 EGR2P11161 476 aaPredicted RBP6.09□□□□□ -1.43
CDH3-209ENST00000569080 GNB3P16520 340 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 RAB3BP20337 219 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 MYL9P24844 172 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 CEACAM6P40199 344 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 KIR2DS1Q14954 304 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 IGSF11Q5DX21 431 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 Q6ZS49 121 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 DRAXINQ8NBI3 349 aaPredicted RBP6.09□□□□□ -1.43
CDH3-209ENST00000569080 MINDY2Q8NBR6 621 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 OR4A4PQ8NGN8 299 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 OR10R2Q8NGX6 335 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 OR8U1Q8NH10 309 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 C4orf3Q8WVX3 66 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 RAB3CQ96E17 227 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 CHCHD6Q9BRQ6 235 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 GHITMQ9H3K2 345 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 FBXL15Q9H469 300 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 GNB4Q9HAV0 340 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.09□□□□□ -1.43
CDH3-209ENST00000569080 PARP11Q9NR21 331 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 TPSG1Q9NRR2 321 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 TXNL4BQ9NX01 149 aaKnown RBP6.09□□□□□ -1.43
CDH3-209ENST00000569080 RDH8Q9NYR8 311 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 ELF5Q9UKW6 265 aaPredicted RBP6.09□□□□□ -1.43
CDH3-209ENST00000569080 WASHC3Q9Y3C0 194 aa6.09□□□□□ -1.43
CDH3-209ENST00000569080 TRBV6-7A0A0A0MS04 114 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 TRAV41A0A0B4J266 112 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 I3L521 148 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 FCN1O00602 326 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 HSPA12AO43301 675 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 RBBP9O75884 186 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 SPDEFO95238 335 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 PSMB9P28065 219 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 MC5RP33032 325 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 SERPINB10P48595 397 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 LUMP51884 338 aaPredicted RBP6.08□□□□□ -1.44
CDH3-209ENST00000569080 CX3CL1P78423 397 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 RUNX1Q01196 453 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 ZNF773Q6PK81 442 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 ZNF491Q8N8L2 437 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.08□□□□□ -1.44
CDH3-209ENST00000569080 MAFIPQ8WZ33 124 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 FCGR1BQ92637 280 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 UBE2E2Q96LR5 201 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 OR2D2Q9H210 308 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 ZNF230Q9UIE0 474 aaPredicted RBP6.08□□□□□ -1.44
CDH3-209ENST00000569080 RNF150Q9ULK6 438 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 STUB1Q9UNE7 303 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 GAB2Q9UQC2 676 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 WSB1Q9Y6I7 421 aa6.08□□□□□ -1.44
CDH3-209ENST00000569080 HUWE1Q7Z6Z7 4374 aaKnown RBP6.07□□□□□ -1.44
CDH3-209ENST00000569080 NOTOA8MTQ0 251 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 IGLV2-23P01705 113 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 TFAP2AP05549 437 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 CRYGBP07316 175 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 GSTT2P0CG29 244 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 GSTT2BP0CG30 244 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 DTYMKP23919 212 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 RANBP1P43487 201 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 GNB1P62873 340 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 PSG5Q15238 335 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 SRSF7Q16629 238 aaKnown RBP eCLIP6.07□□□□□ -1.44
CDH3-209ENST00000569080 ECSCRQ19T08 205 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 MRGPRG-AS1Q2M3A8 158 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 KCTD21Q4G0X4 260 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 ZNF660Q6AZW8 331 aaPredicted RBP6.07□□□□□ -1.44
CDH3-209ENST00000569080 LIN54Q6MZP7 749 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 SFXN4Q6P4A7 337 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 PDPNQ86YL7 162 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 H1FOOQ8IZA3 346 aaPredicted RBP6.07□□□□□ -1.44
CDH3-209ENST00000569080 LGALS14Q8TCE9 139 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 DDB2Q92466 427 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 SLC25A38Q96DW6 304 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 RNF5Q99942 180 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 MCRIP2Q9BUT9 160 aaKnown RBP6.07□□□□□ -1.44
CDH3-209ENST00000569080 YTHDF1Q9BYJ9 559 aaKnown RBP6.07□□□□□ -1.44
CDH3-209ENST00000569080 GPR61Q9BZJ8 451 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 OR51E2Q9H255 320 aa6.07□□□□□ -1.44
CDH3-209ENST00000569080 RNF167Q9H6Y7 350 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms