RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 RAB7AP51149 207 aa14.49□□□□□ -0.09
HERC2-208ENST00000566635 PRB3Q04118 309 aaPredicted RBP14.49□□□□□ -0.09
HERC2-208ENST00000566635 MSMO1Q15800 293 aa14.49□□□□□ -0.09
HERC2-208ENST00000566635 FAM219AQ8IW50 185 aa14.49□□□□□ -0.09
HERC2-208ENST00000566635 ODF3L1Q8IXM7 274 aa14.49□□□□□ -0.09
HERC2-208ENST00000566635 LY6G5BQ8NDX9 201 aa14.49□□□□□ -0.09
HERC2-208ENST00000566635 CLDND2Q8NHS1 167 aa14.49□□□□□ -0.09
HERC2-208ENST00000566635 TMEM56Q96MV1 263 aa14.49□□□□□ -0.09
HERC2-208ENST00000566635 PLSCR3Q9NRY6 295 aa14.49□□□□□ -0.09
HERC2-208ENST00000566635 BOLA1Q9Y3E2 137 aa14.49□□□□□ -0.09
HERC2-208ENST00000566635 TMEM56-RWDD3S4R434 201 aa14.49□□□□□ -0.09
HERC2-208ENST00000566635 ARID1AO14497 2285 aa14.49□□□□□ -0.09
HERC2-208ENST00000566635 LINC00473A8K010 186 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 KIAA1324LA8MWY0 1029 aaPredicted RBP14.48□□□□□ -0.09
HERC2-208ENST00000566635 SRSF4Q08170 494 aaKnown RBP14.48□□□□□ -0.09
HERC2-208ENST00000566635 SLC25A48Q6ZT89 311 aaKnown RBP14.48□□□□□ -0.09
HERC2-208ENST00000566635 IQCF2Q8IXL9 164 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 SELENOHQ8IZQ5 122 aaKnown RBP14.48□□□□□ -0.09
HERC2-208ENST00000566635 LYG1Q8N1E2 194 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 FAM216AQ8WUB2 273 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 ONECUT1Q9UBC0 465 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 CDS2O95674 445 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 ZFP36P26651 326 aaKnown RBP14.48□□□□□ -0.09
HERC2-208ENST00000566635 SRPXP78539 464 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 LRRC37A5PQ49AS3 106 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 ZNF695Q8IW36 515 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 C10orf105Q8TEF2 133 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 TCTEX1D2Q8WW35 142 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 FAM168AQ92567 244 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 PSMG3-AS1Q96PY0 264 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 POLQO75417 2590 aa14.48□□□□□ -0.09
HERC2-208ENST00000566635 LOC105371242A0A075B767 164 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 RNF212BA8MTL3 300 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 M0R1X1 148 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 MARVELD3Q96A59 401 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 PIMREGQ9BSJ6 248 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 BARX1Q9HBU1 254 aaPredicted RBP14.47□□□□□ -0.09
HERC2-208ENST00000566635 SESN1Q9Y6P5 492 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 PTPN13Q12923 2485 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 TRAV14DV4A0A0A6YYC5 116 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 RAMP3O60896 148 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 IGKV1-39P01597 117 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 IGKV1D-39P04432 117 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 LIPFP07098 398 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 BRWD1-AS2P59051 145 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 ZNF585BQ52M93 769 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 CLEC2AQ6UVW9 174 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 ASB13Q8WXK3 278 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 ZNF251Q9BRH9 671 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 RANBP3Q9H6Z4 567 aaPredicted RBP14.47□□□□□ -0.09
HERC2-208ENST00000566635 ABCA12Q86UK0 2595 aa14.47□□□□□ -0.09
HERC2-208ENST00000566635 ANKRD17O75179 2603 aaKnown RBP14.46□□□□□ -0.09
HERC2-208ENST00000566635 IFNA21P01568 189 aa14.46□□□□□ -0.09
HERC2-208ENST00000566635 SERPINE2P07093 398 aa14.46□□□□□ -0.09
HERC2-208ENST00000566635 DUTP33316 252 aaKnown RBP14.46□□□□□ -0.09
HERC2-208ENST00000566635 LMO4P61968 165 aa14.46□□□□□ -0.09
HERC2-208ENST00000566635 CATR1Q13166 79 aa14.46□□□□□ -0.09
HERC2-208ENST00000566635 IAH1Q2TAA2 248 aaPredicted RBP14.46□□□□□ -0.09
HERC2-208ENST00000566635 CCDC28AQ8IWP9 274 aa14.46□□□□□ -0.09
HERC2-208ENST00000566635 PPP1R1CQ8WVI7 109 aa14.46□□□□□ -0.09
HERC2-208ENST00000566635 RBPMSQ93062 196 aaKnown RBP14.46□□□□□ -0.09
HERC2-208ENST00000566635 RAB39BQ96DA2 213 aa14.46□□□□□ -0.09
HERC2-208ENST00000566635 TMEM133Q9H2Q1 129 aa14.46□□□□□ -0.09
HERC2-208ENST00000566635 IGHV4-30-2A0A087WSY4 118 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 A0A087X0M5 115 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 A0A1B0GX30 115 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 A0A1W2PPH5 198 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 SSTR2P30874 369 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 LCN2P80188 198 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 NCR3LG1Q68D85 454 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 ZNF66Q6ZN08 573 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 C2orf50Q96LR7 162 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 HYLS1Q96M11 299 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 HSD17B10Q99714 261 aaKnown RBP14.45□□□□□ -0.1
HERC2-208ENST00000566635 GSX2Q9BZM3 304 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 NMES1Q9C002 83 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 RAB29O14966 203 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 SHOXO15266 292 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 B3GALNT1O75752 331 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 PAX1P15863 534 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 ZNF816Q0VGE8 651 aaPredicted RBP14.45□□□□□ -0.1
HERC2-208ENST00000566635 Q8N7P7 452 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 GSKIPQ9P0R6 139 aa14.45□□□□□ -0.1
HERC2-208ENST00000566635 IGHV4-61A0A0C4DH41 118 aa14.44□□□□□ -0.1
HERC2-208ENST00000566635 A0A0G2JRQ6 117 aa14.44□□□□□ -0.1
HERC2-208ENST00000566635 VWC2LB2RUY7 222 aa14.44□□□□□ -0.1
HERC2-208ENST00000566635 J3QR06 171 aa14.44□□□□□ -0.1
HERC2-208ENST00000566635 ARF6P62330 175 aa14.44□□□□□ -0.1
HERC2-208ENST00000566635 SPAG16Q8N0X2 631 aa14.44□□□□□ -0.1
HERC2-208ENST00000566635 GAB2Q9UQC2 676 aa14.44□□□□□ -0.1
HERC2-208ENST00000566635 TMED3Q9Y3Q3 217 aa14.44□□□□□ -0.1
HERC2-208ENST00000566635 MAP1AP78559 2803 aaPredicted RBP14.44□□□□□ -0.1
HERC2-208ENST00000566635 APCP25054 2843 aa14.44□□□□□ -0.1
HERC2-208ENST00000566635 LPAR6P43657 344 aa14.44□□□□□ -0.1
HERC2-208ENST00000566635 ABHD12Q8N2K0 398 aa14.44□□□□□ -0.1
HERC2-208ENST00000566635 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.44□□□□□ -0.1
HERC2-208ENST00000566635 IL22RA2Q969J5 263 aa14.44□□□□□ -0.1
HERC2-208ENST00000566635 RBMXL1Q96E39 390 aaKnown RBP14.44□□□□□ -0.1
HERC2-208ENST00000566635 ABCA2Q9BZC7 2435 aa14.43□□□□□ -0.1
HERC2-208ENST00000566635 NDUFS8O00217 210 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms