RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 RAB3CQ96E17 227 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 GHITMQ9H3K2 345 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 FBXL15Q9H469 300 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 FBXO7Q9Y3I1 522 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 SMIM30A4D0T7 59 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 OR5H14A6NHG9 310 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 MFNGO00587 321 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 HSPA12AO43301 675 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 IGLV1-40P01703 118 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 GNB3P16520 340 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 RAB3BP20337 219 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 GALP22466 123 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 C19orf54Q5BKX5 351 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 IGSF11Q5DX21 431 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 EDARADDQ8WWZ3 215 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 MAFIPQ8WZ33 124 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 CHCHD6Q9BRQ6 235 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 TOLLIPQ9H0E2 274 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 PARP11Q9NR21 331 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 RDH8Q9NYR8 311 aa11.42□□□□□ -0.58
FANCA-220ENST00000566409 ZNF230Q9UIE0 474 aaPredicted RBP11.42□□□□□ -0.58
FANCA-220ENST00000566409 IGKV1D-8A0A087WSZ0 117 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 RRHO14718 337 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 FABP7O15540 132 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 SOX15O60248 233 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 IGKV1-16P04430 117 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 FCGR3AP08637 254 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 GSTT2P0CG29 244 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 GSTT2BP0CG30 244 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 EGR2P11161 476 aaPredicted RBP11.41□□□□□ -0.58
FANCA-220ENST00000566409 RAB6AP20340 208 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 MYL9P24844 172 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 FGF9P31371 208 aaPredicted RBP11.41□□□□□ -0.58
FANCA-220ENST00000566409 MC5RP33032 325 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 CX3CL1P78423 397 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 MINDY2Q8NBR6 621 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 OR4A4PQ8NGN8 299 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 OR8U1Q8NH10 309 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 GNB4Q9HAV0 340 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 TXNL4BQ9NX01 149 aaKnown RBP11.41□□□□□ -0.58
FANCA-220ENST00000566409 KIAA1456Q9P272 454 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 ELF5Q9UKW6 265 aaPredicted RBP11.41□□□□□ -0.58
FANCA-220ENST00000566409 GAB2Q9UQC2 676 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 WASHC3Q9Y3C0 194 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 TNCP24821 2201 aa11.41□□□□□ -0.58
FANCA-220ENST00000566409 A0A075B6Q4 140 aa11.4□□□□□ -0.58
FANCA-220ENST00000566409 TRBV6-7A0A0A0MS04 114 aa11.4□□□□□ -0.58
FANCA-220ENST00000566409 TRAV41A0A0B4J266 112 aa11.4□□□□□ -0.58
FANCA-220ENST00000566409 H7C2Y5 167 aa11.4□□□□□ -0.58
FANCA-220ENST00000566409 OR5H8P0DN80 308 aa11.4□□□□□ -0.58
FANCA-220ENST00000566409 HIST1H1DP16402 221 aaKnown RBP11.4□□□□□ -0.58
FANCA-220ENST00000566409 PSMB9P28065 219 aa11.4□□□□□ -0.58
FANCA-220ENST00000566409 FHL3Q13643 280 aa11.4□□□□□ -0.58
FANCA-220ENST00000566409 ZNF491Q8N8L2 437 aa11.4□□□□□ -0.58
FANCA-220ENST00000566409 C4orf3Q8WVX3 66 aa11.4□□□□□ -0.58
FANCA-220ENST00000566409 C5orf30Q96GV9 206 aa11.4□□□□□ -0.58
FANCA-220ENST00000566409 CABLES2Q9BTV7 478 aa11.4□□□□□ -0.58
FANCA-220ENST00000566409 I3L521 148 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 BET1O15155 118 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 GSTP1P09211 210 aaKnown RBP11.39□□□□□ -0.59
FANCA-220ENST00000566409 RANBP1P43487 201 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 RAB9AP51151 201 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 CRIP2P52943 208 aaPredicted RBP11.39□□□□□ -0.59
FANCA-220ENST00000566409 RAB25P57735 213 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 PSG5Q15238 335 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 ASPHD1Q5U4P2 390 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 ZNF660Q6AZW8 331 aaPredicted RBP11.39□□□□□ -0.59
FANCA-220ENST00000566409 CASTOR1Q8WTX7 329 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 UBE2E2Q96LR5 201 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 RNF5Q99942 180 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 MCRIP2Q9BUT9 160 aaKnown RBP11.39□□□□□ -0.59
FANCA-220ENST00000566409 YTHDF1Q9BYJ9 559 aaKnown RBP11.39□□□□□ -0.59
FANCA-220ENST00000566409 ZNF221Q9UK13 617 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 NUBP2Q9Y5Y2 271 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 SORL1Q92673 2214 aa11.39□□□□□ -0.59
FANCA-220ENST00000566409 TENM3Q9P273 2699 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 RBBP9O75884 186 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 TFAP2AP05549 437 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 OR8U9P0C7N5 309 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 GADD45AP24522 165 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 SERPINB10P48595 397 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 LUMP51884 338 aaPredicted RBP11.38□□□□□ -0.59
FANCA-220ENST00000566409 GNB1P62873 340 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 ECSCRQ19T08 205 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 OR11H1Q8NG94 326 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 OR5B12Q96R08 314 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 GPR61Q9BZJ8 451 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 ATG5Q9H1Y0 275 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 OR51E2Q9H255 320 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 RNF167Q9H6Y7 350 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 TPSG1Q9NRR2 321 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 SDHAF2Q9NX18 166 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 STUB1Q9UNE7 303 aa11.38□□□□□ -0.59
FANCA-220ENST00000566409 METTL21EPA6NDL7 271 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 NOTOA8MTQ0 251 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 M0R1X1 148 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 DIRAS3O95661 229 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 SSBP2P81877 361 aaPredicted RBP11.37□□□□□ -0.59
FANCA-220ENST00000566409 MRPS15P82914 257 aaKnown RBP11.37□□□□□ -0.59
FANCA-220ENST00000566409 RUNX1Q01196 453 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms