RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 RLN1P04808 185 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 CTSDP07339 412 aaPredicted RBP6.31□□□□□ -1.4
CDH1-208ENST00000565810 SLC6A1P30531 599 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 GNRHRP30968 328 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 BRS3P32247 399 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 REG1BP48304 166 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 THBS3P49746 956 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 PIGPP57054 158 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 TAGLNQ01995 201 aaKnown RBP6.31□□□□□ -1.4
CDH1-208ENST00000565810 ZNF816Q0VGE8 651 aaPredicted RBP6.31□□□□□ -1.4
CDH1-208ENST00000565810 BAMBIQ13145 260 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 CATR1Q13166 79 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 CBX3Q13185 183 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 RGS21Q2M5E4 152 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 PHLDA2Q53GA4 152 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 RPL39P5Q59GN2 51 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 PLET1Q6UQ28 207 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 RBMS3Q6XE24 437 aaKnown RBP6.31□□□□□ -1.4
CDH1-208ENST00000565810 ZNF66Q6ZN08 573 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 ZNF818PQ6ZRF7 136 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 TMED4Q7Z7H5 227 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 LHFPL4Q7Z7J7 247 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 MOB3BQ86TA1 216 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 ODF3L1Q8IXM7 274 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 OR8H3Q8N146 312 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 BVESQ8NE79 360 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 RTN4IP1Q8WWV3 396 aaPredicted RBP6.31□□□□□ -1.4
CDH1-208ENST00000565810 ZDHHC16Q969W1 377 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 HSD17B10Q99714 261 aaKnown RBP6.31□□□□□ -1.4
CDH1-208ENST00000565810 RSRP1Q9BUV0 290 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 GSX1Q9H4S2 264 aaPredicted RBP6.31□□□□□ -1.4
CDH1-208ENST00000565810 PRELID3BQ9Y3B1 194 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 NUBP2Q9Y5Y2 271 aa6.31□□□□□ -1.4
CDH1-208ENST00000565810 CSPG4Q6UVK1 2322 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 IGHV1-3A0A0C4DH29 117 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 TEX13DA0A0J9YY54 714 aaPredicted RBP6.3□□□□□ -1.4
CDH1-208ENST00000565810 A0A0U1RQK1 487 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 BTBD17A6NE02 478 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 LY6LH3BQJ8 138 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 TNFSF12O43508 249 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 PGLYRP1O75594 196 aaPredicted RBP6.3□□□□□ -1.4
CDH1-208ENST00000565810 PTTG1O95997 202 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 APOA2P02652 100 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 TCRBP04435 133 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 H2AFB2P0C5Z0 115 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 CT45A6P0DMU7 189 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 CT45A5P0DMU8 189 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 CT45A7P0DMV0 189 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 RRASP10301 218 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 SRD5A1P18405 259 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 MC5RP33032 325 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 DUTP33316 252 aaKnown RBP6.3□□□□□ -1.4
CDH1-208ENST00000565810 BTCP35070 178 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 RAB13P51153 203 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 TAS2R31P59538 309 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 RND3P61587 244 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 C9orf139Q6ZV77 190 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 IL17RELQ6ZVW7 336 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 Q71RC1 249 aaPredicted RBP6.3□□□□□ -1.4
CDH1-208ENST00000565810 NRARPQ7Z6K4 114 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 LDLRAD3Q86YD5 345 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 SGPP2Q8IWX5 399 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 CENPSQ8N2Z9 138 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 DUSP18Q8NEJ0 188 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 ZFAND2BQ8WV99 257 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 TCTEX1D2Q8WW35 142 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 CAPSLQ8WWF8 208 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 C22orf15Q8WYQ4 148 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 ST6GALNAC6Q969X2 333 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 NABP2Q9BQ15 211 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 ZNF251Q9BRH9 671 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 MRPL20Q9BYC9 149 aaKnown RBP6.3□□□□□ -1.4
CDH1-208ENST00000565810 MEGF9Q9H1U4 602 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 C5orf66Q9H5L9 145 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 SLC2A9Q9NRM0 540 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 VSIG4Q9Y279 399 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 KCNIP3Q9Y2W7 256 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 ABCA1O95477 2261 aa6.3□□□□□ -1.4
CDH1-208ENST00000565810 KIAA2026Q5HYC2 2103 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 ARHGAP32A7KAX9 2087 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 DOCK11Q5JSL3 2073 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 TRAV6A0A075B6T7 132 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 INAFM1C9JVW0 142 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 H7C2Y5 167 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 TIMM23O14925 209 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 ARPC1BO15143 372 aaKnown RBP6.29□□□□□ -1.4
CDH1-208ENST00000565810 MPPED1O15442 326 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 B3GALNT1O75752 331 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 DHFRP00374 187 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 IGLV2-14P01704 120 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 FAM106CPP0CH98 169 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 ANXA3P12429 323 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 AKR1C4P17516 323 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 PI3P19957 117 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 CD1BP29016 333 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 KIR2DS2P43631 304 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 UBE2MP61081 183 aaKnown RBP6.29□□□□□ -1.4
CDH1-208ENST00000565810 DIAPH2-AS1Q14236 149 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 AANATQ16613 207 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 RTL8BQ17RB0 113 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms