RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SPAG16Q8N0X2 631 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 FAM71E2Q8N5Q1 922 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 ZNF439Q8NDP4 499 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 RNASE11Q8TAA1 199 aaKnown RBP16.1■□□□□ 0.17
CLN6-205ENST00000564846 CD300LFQ8TDQ1 290 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 POMT1Q9Y6A1 747 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 RAB29O14966 203 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 SLC31A2O15432 143 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 PPIHO43447 177 aaKnown RBP16.1■□□□□ 0.17
CLN6-205ENST00000564846 ATG12O94817 140 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 IFNA7P01567 189 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 IGHV3-7P01780 117 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 CCL3L1P16619 93 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 DUTP33316 252 aaKnown RBP16.1■□□□□ 0.17
CLN6-205ENST00000564846 LPAR6P43657 344 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 NKX2-1P43699 371 aaPredicted RBP16.1■□□□□ 0.17
CLN6-205ENST00000564846 AKR1C2P52895 323 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 TMEM33P57088 247 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 ZNF841Q6ZN19 808 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 LEAP2Q969E1 77 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 GPR146Q96CH1 333 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 RRNAD1Q96FB5 475 aaKnown RBP16.1■□□□□ 0.17
CLN6-205ENST00000564846 MIOXQ9UGB7 285 aa16.1■□□□□ 0.17
CLN6-205ENST00000564846 E5RGE8 158 aa16.09■□□□□ 0.17
CLN6-205ENST00000564846 BCL2L11O43521 198 aa16.09■□□□□ 0.17
CLN6-205ENST00000564846 PROP1O75360 226 aa16.09■□□□□ 0.17
CLN6-205ENST00000564846 NDUFA5Q16718 116 aa16.09■□□□□ 0.17
CLN6-205ENST00000564846 NSG2Q9Y328 171 aa16.09■□□□□ 0.17
CLN6-205ENST00000564846 LINC00473A8K010 186 aa16.08■□□□□ 0.17
CLN6-205ENST00000564846 KCNAB3O43448 404 aa16.08■□□□□ 0.17
CLN6-205ENST00000564846 RAMP3O60896 148 aa16.08■□□□□ 0.17
CLN6-205ENST00000564846 F12P00748 615 aaPredicted RBP16.08■□□□□ 0.17
CLN6-205ENST00000564846 IGKV1-5P01602 117 aa16.08■□□□□ 0.17
CLN6-205ENST00000564846 UTF1Q5T230 341 aa16.08■□□□□ 0.17
CLN6-205ENST00000564846 SLC25A48Q6ZT89 311 aaKnown RBP16.08■□□□□ 0.17
CLN6-205ENST00000564846 OR8B3Q8NGG8 313 aa16.08■□□□□ 0.17
CLN6-205ENST00000564846 NEIL1Q96FI4 390 aaPredicted RBP16.08■□□□□ 0.17
CLN6-205ENST00000564846 OR8B2Q96RD0 313 aa16.08■□□□□ 0.17
CLN6-205ENST00000564846 SPOCK3Q9BQ16 436 aa16.08■□□□□ 0.17
CLN6-205ENST00000564846 A0A0G2JRQ6 117 aa16.08■□□□□ 0.16
CLN6-205ENST00000564846 C17orf98A8MV24 154 aa16.08■□□□□ 0.16
CLN6-205ENST00000564846 M0R1X1 148 aa16.08■□□□□ 0.16
CLN6-205ENST00000564846 PITX3O75364 302 aa16.08■□□□□ 0.16
CLN6-205ENST00000564846 CDKN1AP38936 164 aa16.08■□□□□ 0.16
CLN6-205ENST00000564846 ARPC5LQ9BPX5 153 aa16.08■□□□□ 0.16
CLN6-205ENST00000564846 PLEKHA2Q9HB19 425 aa16.08■□□□□ 0.16
CLN6-205ENST00000564846 A0A1W2PPE3 182 aa16.07■□□□□ 0.16
CLN6-205ENST00000564846 RNF224P0DH78 156 aa16.07■□□□□ 0.16
CLN6-205ENST00000564846 EFNA4P52798 201 aa16.07■□□□□ 0.16
CLN6-205ENST00000564846 BRWD1-AS2P59051 145 aa16.07■□□□□ 0.16
CLN6-205ENST00000564846 ID3Q02535 119 aa16.07■□□□□ 0.16
CLN6-205ENST00000564846 EXOSC2Q13868 293 aaKnown RBP16.07■□□□□ 0.16
CLN6-205ENST00000564846 RPL39P5Q59GN2 51 aa16.07■□□□□ 0.16
CLN6-205ENST00000564846 OR2B11Q5JQS5 317 aa16.07■□□□□ 0.16
CLN6-205ENST00000564846 LYG1Q8N1E2 194 aa16.07■□□□□ 0.16
CLN6-205ENST00000564846 UBQLN2Q9UHD9 624 aa16.07■□□□□ 0.16
CLN6-205ENST00000564846 MMP24Q9Y5R2 645 aa16.07■□□□□ 0.16
CLN6-205ENST00000564846 HRNRQ86YZ3 2850 aaPredicted RBP16.06■□□□□ 0.16
CLN6-205ENST00000564846 SAA2-SAA4A0A096LPE2 208 aa16.06■□□□□ 0.16
CLN6-205ENST00000564846 A0A1W2PPH5 198 aa16.06■□□□□ 0.16
CLN6-205ENST00000564846 MSGN1A6NI15 193 aa16.06■□□□□ 0.16
CLN6-205ENST00000564846 CFDP00746 253 aaPredicted RBP16.06■□□□□ 0.16
CLN6-205ENST00000564846 SAA2P0DJI9 122 aaPredicted RBP16.06■□□□□ 0.16
CLN6-205ENST00000564846 HKR1P10072 659 aa16.06■□□□□ 0.16
CLN6-205ENST00000564846 EPHA1P21709 976 aa16.06■□□□□ 0.16
CLN6-205ENST00000564846 RPL12P30050 165 aaKnown RBP16.06■□□□□ 0.16
CLN6-205ENST00000564846 GNG10P50151 68 aa16.06■□□□□ 0.16
CLN6-205ENST00000564846 DLX6P56179 175 aa16.06■□□□□ 0.16
CLN6-205ENST00000564846 TLE4Q04727 773 aa16.06■□□□□ 0.16
CLN6-205ENST00000564846 ZNF816Q0VGE8 651 aaPredicted RBP16.06■□□□□ 0.16
CLN6-205ENST00000564846 NCR3LG1Q68D85 454 aa16.06■□□□□ 0.16
CLN6-205ENST00000564846 ODF3L1Q8IXM7 274 aa16.06■□□□□ 0.16
CLN6-205ENST00000564846 RCL1Q9Y2P8 373 aaKnown RBP16.06■□□□□ 0.16
CLN6-205ENST00000564846 PRELID3BQ9Y3B1 194 aa16.06■□□□□ 0.16
CLN6-205ENST00000564846 ZFYVE26Q68DK2 2539 aa16.06■□□□□ 0.16
CLN6-205ENST00000564846 RBFOX2O43251 390 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLN6-205ENST00000564846 PVALBP20472 110 aaPredicted RBP16.05■□□□□ 0.16
CLN6-205ENST00000564846 KIR2DS2P43631 304 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 P2RY1P47900 373 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 UBA52P62987 128 aaKnown RBP16.05■□□□□ 0.16
CLN6-205ENST00000564846 CXorf66Q5JRM2 361 aaPredicted RBP16.05■□□□□ 0.16
CLN6-205ENST00000564846 C8orf31Q8N9H6 132 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 CACNG5Q9UF02 275 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 ITGB1BP2Q9UKP3 347 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 S1PR2O95136 353 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 ERVFRD-1P60508 538 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 POLR2GP62487 172 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLN6-205ENST00000564846 WDR25Q64LD2 544 aaPredicted RBP16.05■□□□□ 0.16
CLN6-205ENST00000564846 DMBX1Q8NFW5 382 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 ADTRPQ96IZ2 230 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 S1PR3Q99500 378 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 ZNF251Q9BRH9 671 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 ZC4H2Q9NQZ6 224 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 COA4Q9NYJ1 87 aa16.05■□□□□ 0.16
CLN6-205ENST00000564846 DOPEY1Q5JWR5 2465 aa16.04■□□□□ 0.16
CLN6-205ENST00000564846 EPG5Q9HCE0 2579 aa16.04■□□□□ 0.16
CLN6-205ENST00000564846 A0A087X0M5 115 aa16.04■□□□□ 0.16
CLN6-205ENST00000564846 A0A1B0GX30 115 aa16.04■□□□□ 0.16
CLN6-205ENST00000564846 F5H0A9 414 aaPredicted RBP16.04■□□□□ 0.16
CLN6-205ENST00000564846 OVOL3O00110 214 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms