RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 MC5RP33032 325 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 CHRNA7P36544 502 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 PSMD7P51665 324 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 CD69Q07108 199 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 C9orf66Q5T8R8 295 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 C11orf87Q6NUJ2 197 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 CASTOR1Q8WTX7 329 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 CHCHD6Q9BRQ6 235 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 FBXO7Q9Y3I1 522 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 IGKV1-6A0A0C4DH72 117 aa13.77□□□□□ -0.21
NME3-205ENST00000563854 TRDCB7Z8K6 153 aa13.77□□□□□ -0.21
NME3-205ENST00000563854 ITGB1BP1O14713 200 aa13.77□□□□□ -0.21
NME3-205ENST00000563854 RANBP1P43487 201 aa13.77□□□□□ -0.21
NME3-205ENST00000563854 MOGAT2Q3SYC2 334 aa13.77□□□□□ -0.21
NME3-205ENST00000563854 ZNF491Q8N8L2 437 aa13.77□□□□□ -0.21
NME3-205ENST00000563854 RAB3CQ96E17 227 aa13.77□□□□□ -0.21
NME3-205ENST00000563854 AGMATQ9BSE5 352 aa13.77□□□□□ -0.21
NME3-205ENST00000563854 RDH8Q9NYR8 311 aa13.77□□□□□ -0.21
NME3-205ENST00000563854 METTL1Q9UBP6 276 aaKnown RBP13.77□□□□□ -0.21
NME3-205ENST00000563854 ZMAT5Q9UDW3 170 aaKnown RBP13.77□□□□□ -0.21
NME3-205ENST00000563854 RAB22AQ9UL26 194 aa13.77□□□□□ -0.21
NME3-205ENST00000563854 VSIG4Q9Y279 399 aa13.77□□□□□ -0.21
NME3-205ENST00000563854 A0A0B4J203 849 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 SMIM30A4D0T7 59 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 FCN1O00602 326 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 BET1O15155 118 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 LDLRAD4O15165 306 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 IGLV1-40P01703 118 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 ECI1P42126 302 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 LINC00205P59089 165 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 GNB1P62873 340 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 CX3CL1P78423 397 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 ZNF260Q3ZCT1 412 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 OR1N2Q8NGR9 330 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 MYOZ3Q8TDC0 251 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 MAFIPQ8WZ33 124 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 UBE2E2Q96LR5 201 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 PRR25Q96S07 402 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 FAM103A1Q9BTL3 118 aaKnown RBP13.76□□□□□ -0.21
NME3-205ENST00000563854 NDUFB11Q9NX14 153 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 GAB2Q9UQC2 676 aa13.76□□□□□ -0.21
NME3-205ENST00000563854 SHISA3A0PJX4 238 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 M0R1X1 148 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 FABP7O15540 132 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 RBBP9O75884 186 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 APOA2P02652 100 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 TFAP2AP05549 437 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 FCGR3AP08637 254 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 OR8U8P0C7N1 319 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 GNB3P16520 340 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 RAB3BP20337 219 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 GADD45AP24522 165 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 RAB9AP51151 201 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 RPS16P62249 146 aaKnown RBP13.75□□□□□ -0.21
NME3-205ENST00000563854 ZNF616Q08AN1 781 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 FHL3Q13643 280 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 ZNF660Q6AZW8 331 aaPredicted RBP13.75□□□□□ -0.21
NME3-205ENST00000563854 C22orf42Q6IC83 251 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 OR5AN1Q8NGI8 311 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 ALX4Q9H161 411 aaPredicted RBP13.75□□□□□ -0.21
NME3-205ENST00000563854 GHITMQ9H3K2 345 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 RAB26Q9ULW5 256 aa13.75□□□□□ -0.21
NME3-205ENST00000563854 FOXA2Q9Y261 457 aaPredicted RBP13.75□□□□□ -0.21
NME3-205ENST00000563854 TRAV1-2A0A0B4J238 106 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 IFITM5A6NNB3 132 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 I3L521 148 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 RAMP3O60896 148 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 CA2P00918 260 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 IGKV1-16P04430 117 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 SNRPBP14678 240 aaKnown RBP13.74□□□□□ -0.21
NME3-205ENST00000563854 KIAA0141Q14154 515 aaPredicted RBP13.74□□□□□ -0.21
NME3-205ENST00000563854 PSG5Q15238 335 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 IGSF11Q5DX21 431 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 VAX1Q5SQQ9 334 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 PPP1R27Q86WC6 154 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 ZNF383Q8NA42 475 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 MINDY2Q8NBR6 621 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 OR4A4PQ8NGN8 299 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 OR10R2Q8NGX6 335 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 PTX4Q96A99 478 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 TSNAXQ99598 290 aaKnown RBP13.74□□□□□ -0.21
NME3-205ENST00000563854 OR2D2Q9H210 308 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 TPSG1Q9NRR2 321 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 ZNF230Q9UIE0 474 aaPredicted RBP13.74□□□□□ -0.21
NME3-205ENST00000563854 KCNK7Q9Y2U2 307 aa13.74□□□□□ -0.21
NME3-205ENST00000563854 SLC25A17O43808 307 aa13.73□□□□□ -0.21
NME3-205ENST00000563854 SOX15O60248 233 aa13.73□□□□□ -0.21
NME3-205ENST00000563854 PROP1O75360 226 aa13.73□□□□□ -0.21
NME3-205ENST00000563854 LY86O95711 162 aa13.73□□□□□ -0.21
NME3-205ENST00000563854 OR8U9P0C7N5 309 aa13.73□□□□□ -0.21
NME3-205ENST00000563854 GSTT2P0CG29 244 aa13.73□□□□□ -0.21
NME3-205ENST00000563854 GSTT2BP0CG30 244 aa13.73□□□□□ -0.21
NME3-205ENST00000563854 PSMB9P28065 219 aa13.73□□□□□ -0.21
NME3-205ENST00000563854 SERPINB10P48595 397 aa13.73□□□□□ -0.21
NME3-205ENST00000563854 TMEM267Q0VDI3 215 aaPredicted RBP13.73□□□□□ -0.21
NME3-205ENST00000563854 DCTN2Q13561 401 aaKnown RBP13.73□□□□□ -0.21
NME3-205ENST00000563854 ARFRP1Q13795 201 aa13.73□□□□□ -0.21
NME3-205ENST00000563854 ASPHD1Q5U4P2 390 aa13.73□□□□□ -0.21
NME3-205ENST00000563854 UNQ5815/PRO19632Q6UWF5 114 aa13.73□□□□□ -0.21
NME3-205ENST00000563854 OR10J5Q8NHC4 309 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms