RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 SDF2L1Q9HCN8 221 aa16.98■□□□□ 0.31
RPUSD1-202ENST00000561734 FZR1Q9UM11 496 aa16.98■□□□□ 0.31
RPUSD1-202ENST00000561734 CHD3Q12873 2000 aaKnown RBP16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 M0R296 226 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 HIST1H2BKO60814 126 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 TRGC2P03986 189 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 HIST1H2BJP06899 126 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 HIST1H2BOP23527 126 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 HIST1H2BBP33778 126 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 CDX1P47902 265 aaPredicted RBP16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 SOX8P57073 446 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 HIST1H2BDP58876 126 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 HIST1H2BCP62807 126 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 HIST2H2BEQ16778 126 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 ACSM6Q6P461 480 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 ACP7Q6ZNF0 438 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 HIST1H2BHQ93079 126 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 LHX4Q969G2 390 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 LOXL4Q96JB6 756 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 HIST1H2BNQ99877 126 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 HIST1H2BMQ99879 126 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 TOLLIPQ9H0E2 274 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 METRNQ9UJH8 293 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 TIMM9Q9Y5J7 89 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 GTF3C1Q12789 2109 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 NCOR1O75376 2440 aa16.97■□□□□ 0.31
RPUSD1-202ENST00000561734 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 ZNF737O75373 536 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 CATR1Q13166 79 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 SPNS3Q6ZMD2 512 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 TPRX1Q8N7U7 411 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 NINJ1Q92982 152 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 CXXC4Q9H2H0 198 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 SLC39A9Q9NUM3 307 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 UFSP2Q9NUQ7 469 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 HMGB3O15347 200 aaKnown RBP16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 PTBP3O95758 552 aaKnown RBP16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 IFNA1P01562 189 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 SSTR5P35346 364 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 WDR82Q6UXN9 313 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 ZDHHC16Q969W1 377 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 SSX3Q99909 188 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 TMEM242Q9NWH2 141 aa16.96■□□□□ 0.31
RPUSD1-202ENST00000561734 CLDN34H7C241 214 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 ZG16O60844 167 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 IGKV3-15P01624 115 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 RND2P52198 227 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 LINC00205P59089 165 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 CD81P60033 236 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 RPS16P62249 146 aaKnown RBP16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 GUSBP1Q15486 140 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 WDR25Q64LD2 544 aaPredicted RBP16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 CENPVQ7Z7K6 275 aaPredicted RBP16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 C1orf87Q8N0U7 546 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 WDR31Q8NA23 367 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 FAM210BQ96KR6 192 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 GGACTQ9BVM4 153 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 SLC25A22Q9H936 323 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 IGHV3-43A0A0B4J1X8 118 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 OR5H1A6NKK0 313 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 PMS2P5A8MQ11 134 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 IGHV3-43DP0DP04 118 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 TLE1Q04724 770 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 VWA1Q6PCB0 445 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 DTD1Q8TEA8 209 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 TMEM147Q9BVK8 224 aa16.95■□□□□ 0.3
RPUSD1-202ENST00000561734 SPENQ96T58 3664 aaKnown RBP16.94■□□□□ 0.3
RPUSD1-202ENST00000561734 TIMM8AO60220 97 aaPredicted RBP16.94■□□□□ 0.3
RPUSD1-202ENST00000561734 HOXC12P31275 282 aa16.94■□□□□ 0.3
RPUSD1-202ENST00000561734 OR13A1Q8NGR1 328 aa16.94■□□□□ 0.3
RPUSD1-202ENST00000561734 MSL2Q9HCI7 577 aa16.94■□□□□ 0.3
RPUSD1-202ENST00000561734 IGHG3P01860 377 aa16.94■□□□□ 0.3
RPUSD1-202ENST00000561734 FGF7P21781 194 aa16.94■□□□□ 0.3
RPUSD1-202ENST00000561734 KIR2DL2P43627 348 aaPredicted RBP16.94■□□□□ 0.3
RPUSD1-202ENST00000561734 COL10A1Q03692 680 aa16.94■□□□□ 0.3
RPUSD1-202ENST00000561734 SPINK9Q5DT21 86 aa16.94■□□□□ 0.3
RPUSD1-202ENST00000561734 OR13D1Q8NGV5 346 aa16.94■□□□□ 0.3
RPUSD1-202ENST00000561734 CLDN14O95500 239 aa16.93■□□□□ 0.3
RPUSD1-202ENST00000561734 S100PP25815 95 aa16.93■□□□□ 0.3
RPUSD1-202ENST00000561734 MEF2BQ02080 365 aaPredicted RBP16.93■□□□□ 0.3
RPUSD1-202ENST00000561734 TFF3Q07654 80 aa16.93■□□□□ 0.3
RPUSD1-202ENST00000561734 SRSF6Q13247 344 aaKnown RBP16.93■□□□□ 0.3
RPUSD1-202ENST00000561734 RFESDQ8TAC1 157 aa16.93■□□□□ 0.3
RPUSD1-202ENST00000561734 PRR7Q8TB68 274 aa16.93■□□□□ 0.3
RPUSD1-202ENST00000561734 LINC00473A8K010 186 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 DEFB108AA8MXU0 73 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 CECR9P0C854 216 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 COX5AP20674 150 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 FABP6P51161 128 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 PMS2P11Q13670 270 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 ATP6V1FQ16864 119 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 Q3ZCU0 254 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 H2BFWTQ7Z2G1 175 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 C9orf106Q8NAJ2 232 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 OR10P1Q8NGE3 313 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 DIDO1Q9BTC0 2240 aaKnown RBP16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 RAB29O14966 203 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 ST8SIA5O15466 376 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms