RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 DNM1P46Q6ZS02 220 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 SNRNP40Q96DI7 357 aaKnown RBP13.8□□□□□ -0.2
AP4E1-205ENST00000561393 ABHD14AQ9BUJ0 271 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 ONECUT1Q9UBC0 465 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 GAPDHP04406 335 aaKnown RBP13.8□□□□□ -0.2
AP4E1-205ENST00000561393 RPL19P84098 196 aaKnown RBP13.8□□□□□ -0.2
AP4E1-205ENST00000561393 BSPH1Q075Z2 132 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 FFAR4Q5NUL3 377 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 RBMXL3Q8N7X1 1067 aaKnown RBP13.8□□□□□ -0.2
AP4E1-205ENST00000561393 ZNF727A8MUV8 499 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 UCP1P25874 307 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 MYPOPQ86VE0 399 aaPredicted RBP13.8□□□□□ -0.2
AP4E1-205ENST00000561393 H1FOOQ8IZA3 346 aaPredicted RBP13.8□□□□□ -0.2
AP4E1-205ENST00000561393 ZFP82Q8N141 532 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 OR4F5Q8NH21 305 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 OR4F4Q96R69 305 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 PSPNO60542 156 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 S1PR2O95136 353 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 IGLV3-1P01715 115 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 FHITP49789 147 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 UBE2G2P60604 165 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 RTP5Q14D33 572 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 ACOT6Q3I5F7 207 aaPredicted RBP13.8□□□□□ -0.2
AP4E1-205ENST00000561393 MRPL37Q9BZE1 423 aaKnown RBP13.8□□□□□ -0.2
AP4E1-205ENST00000561393 MED9Q9NWA0 146 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 WSB1Q9Y6I7 421 aa13.8□□□□□ -0.2
AP4E1-205ENST00000561393 FAM208BQ5VWN6 2430 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.79□□□□□ -0.2
AP4E1-205ENST00000561393 TRBV6-7A0A0A0MS04 114 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 DEFA4P12838 97 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 ACY3Q96HD9 319 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 SLC35E1Q96K37 410 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 RHOVQ96L33 236 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 RSG1Q9BU20 258 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 ACACBO00763 2458 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 ATRXP46100 2492 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 FAM216BQ8N7L0 139 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 MAP1LC3B2A6NCE7 125 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 TRIM77I1YAP6 450 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 SULT1A2P50226 295 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 MAP1LC3BQ9GZQ8 125 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 SH3BGRL3Q9H299 93 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 KCNIP2Q9NS61 270 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 MMP24Q9Y5R2 645 aa13.79□□□□□ -0.2
AP4E1-205ENST00000561393 ANKHD1Q8IWZ3 2542 aaKnown RBP13.78□□□□□ -0.2
AP4E1-205ENST00000561393 EIF3GO75821 320 aaKnown RBP eCLIP13.78□□□□□ -0.2
AP4E1-205ENST00000561393 NAPSAO96009 420 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 ZNF474Q6S9Z5 364 aaPredicted RBP13.78□□□□□ -0.2
AP4E1-205ENST00000561393 WDR31Q8NA23 367 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 WISP2O76076 250 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 COMMD1Q8N668 190 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 UBAC2Q8NBM4 344 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 MFSD2BA6NFX1 497 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 IFNL4K9M1U5 179 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 MBP02144 154 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 HOXA4Q00056 320 aaPredicted RBP13.78□□□□□ -0.2
AP4E1-205ENST00000561393 ASCL4Q6XD76 172 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 VKORC1L1Q8N0U8 176 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 ADTRPQ96IZ2 230 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 TMEM147Q9BVK8 224 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 RAB1BQ9H0U4 201 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 BIN3Q9NQY0 253 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 IL19Q9UHD0 177 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 SLC25A15Q9Y619 301 aa13.78□□□□□ -0.2
AP4E1-205ENST00000561393 RAB29O14966 203 aa13.77□□□□□ -0.2
AP4E1-205ENST00000561393 SCAF4O95104 1147 aaKnown RBP13.77□□□□□ -0.2
AP4E1-205ENST00000561393 MRGPRGQ86SM5 289 aa13.77□□□□□ -0.2
AP4E1-205ENST00000561393 LYRM2Q9NU23 88 aaPredicted RBP13.77□□□□□ -0.2
AP4E1-205ENST00000561393 MBD3L4A6NDZ8 208 aaPredicted RBP13.77□□□□□ -0.21
AP4E1-205ENST00000561393 MBD3L3A6NE82 208 aaPredicted RBP13.77□□□□□ -0.21
AP4E1-205ENST00000561393 MBD3L5A6NJ08 208 aaPredicted RBP13.77□□□□□ -0.21
AP4E1-205ENST00000561393 A8MXE2 369 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 MLNRO43193 412 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 SUB1P53999 127 aaKnown RBP eCLIP13.77□□□□□ -0.21
AP4E1-205ENST00000561393 ARSJQ5FYB0 599 aaPredicted RBP13.77□□□□□ -0.21
AP4E1-205ENST00000561393 AVPI1Q5T686 147 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 NCR3LG1Q68D85 454 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 MBD3L2Q8NHZ7 208 aaPredicted RBP13.77□□□□□ -0.21
AP4E1-205ENST00000561393 NANPQ8TBE9 248 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 C2CD4CQ8TF44 421 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 BTBD17A6NE02 478 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 MUC1P15941 1255 aaPredicted RBP13.77□□□□□ -0.21
AP4E1-205ENST00000561393 TIMP3P35625 211 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 LYPD6Q86Y78 171 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 DOLPP1Q86YN1 238 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 GTF3AQ92664 365 aaKnown RBP13.77□□□□□ -0.21
AP4E1-205ENST00000561393 RPEQ96AT9 228 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 PARP11Q9NR21 331 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 RPH3ALQ9UNE2 315 aa13.77□□□□□ -0.21
AP4E1-205ENST00000561393 ZNF497Q6ZNH5 498 aa13.76□□□□□ -0.21
AP4E1-205ENST00000561393 C20orf204Q6ZNR8 217 aa13.76□□□□□ -0.21
AP4E1-205ENST00000561393 FRZBQ92765 325 aa13.76□□□□□ -0.21
AP4E1-205ENST00000561393 SMIM7Q9BQ49 75 aa13.76□□□□□ -0.21
AP4E1-205ENST00000561393 SLC35B3Q9H1N7 401 aa13.76□□□□□ -0.21
AP4E1-205ENST00000561393 OR7C2O60412 319 aa13.76□□□□□ -0.21
AP4E1-205ENST00000561393 PITX3O75364 302 aa13.76□□□□□ -0.21
AP4E1-205ENST00000561393 SELLP14151 372 aa13.76□□□□□ -0.21
AP4E1-205ENST00000561393 TBR1Q16650 682 aa13.76□□□□□ -0.21
AP4E1-205ENST00000561393 RPL39P5Q59GN2 51 aa13.76□□□□□ -0.21
AP4E1-205ENST00000561393 LHFPL5Q8TAF8 219 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms