RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	CTDSP2	O14595	271 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	ST8SIA5	O15466	376 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	SAA2	P0DJI9	122 aa	Predicted RBP	10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	CD40LG	P29965	261 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	IGSF11	Q5DX21	431 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	UBE2NL	Q5JXB2	153 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	ZNF833P	Q6ZTB9	187 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	SAMD12	Q8N8I0	201 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	OR10J5	Q8NHC4	309 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	MAFIP	Q8WZ33	124 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	EAF1	Q96JC9	268 aa	Predicted RBP	10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	CITED1	Q99966	193 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	ST6GALNAC5	Q9BVH7	336 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	TOLLIP	Q9H0E2	274 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	RDH8	Q9NYR8	311 aa		10.91	□□□□□ -0.66
CHRNB4-204	ENST00000559849	PKD1L1	Q8TDX9	2849 aa		10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	BET1	O15155	118 aa		10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	M6PR	P20645	277 aa		10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	OR3A3	P47888	321 aa		10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	SRSF4	Q08170	494 aa	Known RBP	10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	ABCA11P	Q4W5N1	156 aa		10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	FAM71F2	Q6NXP2	309 aa		10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849		Q6ZS46	218 aa		10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	NUDCD2	Q8WVJ2	157 aa		10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	AP3S1	Q92572	193 aa		10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	CABLES2	Q9BTV7	478 aa		10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	PARP12	Q9H0J9	701 aa	Known RBP	10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	MOB4	Q9Y3A3	225 aa		10.9	□□□□□ -0.66
CHRNB4-204	ENST00000559849	TRBV6-7	A0A0A0MS04	114 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	RGS5	O15539	181 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	XRCC3	O43542	346 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	MOS	P00540	346 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	AMY1A	P04745	511 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	AMY2A	P04746	511 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	KRTAP10-3	P60369	221 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	SGMS2	Q8NHU3	365 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	ACOT12	Q8WYK0	555 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	ABHD14B	Q96IU4	210 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	SERTAD4	Q9NUC0	356 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	ZNF736	B4DX44	427 aa	Predicted RBP	10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	FGF16	O43320	207 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	PEX14	O75381	377 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	CTXN2	P0C2S0	81 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	AKAP14	Q86UN6	197 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	CMTM3	Q96MX0	182 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	ZNF251	Q9BRH9	671 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	GINS4	Q9BRT9	223 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	AUNIP	Q9H7T9	357 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	COMMD3	Q9UBI1	195 aa		10.89	□□□□□ -0.67
CHRNB4-204	ENST00000559849	MGAM2	Q2M2H8	2515 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	SSX5	O60225	188 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849		Q8N6K4	173 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	OR8H1	Q8NGG4	311 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	NABP2	Q9BQ15	211 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	MRPL20	Q9BYC9	149 aa	Known RBP	10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	ZNF221	Q9UK13	617 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	RNF150	Q9ULK6	438 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	WNK1	Q9H4A3	2382 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	IGKV1D-8	A0A087WSZ0	117 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	NCBP2L	A6PVI3	153 aa	Known RBP	10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	TNFSF8	P32971	234 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	ETV6	P41212	452 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	VDAC2	P45880	294 aa	Predicted RBP	10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	PPP5C	P53041	499 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	CTAG1A	P78358	180 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	ZNF45	Q02386	682 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	RPL39P5	Q59GN2	51 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	SPANXN2	Q5MJ10	180 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	LAX1	Q8IWV1	398 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	KLHDC1	Q8N7A1	406 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	C5orf56	Q8N8D9	126 aa		10.88	□□□□□ -0.67
CHRNB4-204	ENST00000559849	NBEAL1	Q6ZS30	2694 aa		10.87	□□□□□ -0.67
CHRNB4-204	ENST00000559849	OR8U9	P0C7N5	309 aa		10.87	□□□□□ -0.67
CHRNB4-204	ENST00000559849	VSIG10L2	P0DP72	767 aa		10.87	□□□□□ -0.67
CHRNB4-204	ENST00000559849	GPR12	P47775	334 aa		10.87	□□□□□ -0.67
CHRNB4-204	ENST00000559849	MZT2A	Q6P582	158 aa		10.87	□□□□□ -0.67
CHRNB4-204	ENST00000559849	CNIH2	Q6PI25	160 aa		10.87	□□□□□ -0.67
CHRNB4-204	ENST00000559849	CCDC190	Q86UF4	302 aa		10.87	□□□□□ -0.67
CHRNB4-204	ENST00000559849	OR8U1	Q8NH10	309 aa		10.87	□□□□□ -0.67
CHRNB4-204	ENST00000559849	WNT10A	Q9GZT5	417 aa		10.87	□□□□□ -0.67
CHRNB4-204	ENST00000559849	ANXA10	Q9UJ72	324 aa		10.87	□□□□□ -0.67
CHRNB4-204	ENST00000559849	APOA1	P02647	267 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	CT45A6	P0DMU7	189 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	CT45A5	P0DMU8	189 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	CT45A7	P0DMV0	189 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	MC5R	P33032	325 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	C9orf152	Q5JTZ5	239 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	TMEM69	Q5SWH9	247 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	PLSCR3	Q9NRY6	295 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	GAB2	Q9UQC2	676 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	OR5H14	A6NHG9	310 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	SH2D7	A6NKC9	451 aa	Predicted RBP	10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	PROP1	O75360	226 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	CBX5	P45973	191 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	BEST4	Q8NFU0	473 aa		10.86	□□□□□ -0.67
CHRNB4-204	ENST00000559849	MIXL1	Q9H2W2	232 aa		10.86	□□□□□ -0.67

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