RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 DUSP21Q9H596 190 aa9.53□□□□□ -0.88
SPG11-219ENST00000559822 AK6Q9Y3D8 172 aaKnown RBP9.53□□□□□ -0.88
SPG11-219ENST00000559822 U3KQK5 164 aa9.53□□□□□ -0.88
SPG11-219ENST00000559822 COL7A1Q02388 2944 aa9.52□□□□□ -0.88
SPG11-219ENST00000559822 LINC01619G3V211 115 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 OVOL1O14753 267 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 ARPC1BO15143 372 aaKnown RBP9.52□□□□□ -0.89
SPG11-219ENST00000559822 LY86O95711 162 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 APOA2P02652 100 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 CPEP16870 476 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 SERPINB10P48595 397 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 VEGFCP49767 419 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 AQP4P55087 323 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 GNB1P62873 340 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 NDPQ00604 133 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 AKIRIN2Q53H80 203 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 ACTBL2Q562R1 376 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 C19orf54Q5BKX5 351 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 CD200R1LQ6Q8B3 271 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 GLDNQ6ZMI3 551 aaPredicted RBP9.52□□□□□ -0.89
SPG11-219ENST00000559822 TMEM91Q6ZNR0 172 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 PRSS48Q7RTY5 328 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 PPP1R27Q86WC6 154 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 ARHGAP5-AS1Q96IT6 56 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 CCDC90BQ9GZT6 254 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 TOLLIPQ9H0E2 274 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 VCX3BQ9H321 246 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 SLA2Q9H6Q3 261 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 Q9N2K0 584 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 ACOT13Q9NPJ3 140 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 OR1A1Q9P1Q5 309 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 METTL1Q9UBP6 276 aaKnown RBP9.52□□□□□ -0.89
SPG11-219ENST00000559822 A3GALT2U3KPV4 340 aa9.52□□□□□ -0.89
SPG11-219ENST00000559822 FOXI3A8MTJ6 420 aaPredicted RBP9.51□□□□□ -0.89
SPG11-219ENST00000559822 SAP30O75446 220 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 TFAP2AP05549 437 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 LGALS1P09382 135 aaKnown RBP9.51□□□□□ -0.89
SPG11-219ENST00000559822 SCTP09683 121 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 CALRP27797 417 aaKnown RBP9.51□□□□□ -0.89
SPG11-219ENST00000559822 RPS25P62851 125 aaKnown RBP9.51□□□□□ -0.89
SPG11-219ENST00000559822 ASPHD1Q5U4P2 390 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 UNQ5815/PRO19632Q6UWF5 114 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 ZNF562Q6V9R5 426 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 PDPNQ86YL7 162 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.51□□□□□ -0.89
SPG11-219ENST00000559822 OR4A4PQ8NGN8 299 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 FAM3DQ96BQ1 224 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 FLYWCH2Q96CP2 140 aaKnown RBP9.51□□□□□ -0.89
SPG11-219ENST00000559822 MGLLQ99685 303 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 HDHD3Q9BSH5 251 aaPredicted RBP9.51□□□□□ -0.89
SPG11-219ENST00000559822 CENPOQ9BU64 300 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 PECRQ9BY49 303 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 PARP12Q9H0J9 701 aaKnown RBP9.51□□□□□ -0.89
SPG11-219ENST00000559822 FBXO7Q9Y3I1 522 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 NUBP2Q9Y5Y2 271 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 SMAD5-AS1Q9Y6J3 95 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 V9GY05 133 aa9.51□□□□□ -0.89
SPG11-219ENST00000559822 TRDCB7Z8K6 153 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 PDCD5O14737 125 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 DENRO43583 198 aaKnown RBP9.5□□□□□ -0.89
SPG11-219ENST00000559822 SOX15O60248 233 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 DIRAS3O95661 229 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 CD3GP09693 182 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 OR8U9P0C7N5 309 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 GADD45AP24522 165 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 TMEM50BP56557 158 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 TPPP2P59282 170 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 RPS16P62249 146 aaKnown RBP9.5□□□□□ -0.89
SPG11-219ENST00000559822 TAGLNQ01995 201 aaKnown RBP9.5□□□□□ -0.89
SPG11-219ENST00000559822 CBX3Q13185 183 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 PSG5Q15238 335 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 C2orf76Q3KRA6 126 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 OR6Q1Q8NGQ2 317 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 DCUN1D4Q92564 292 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 ARPC1AQ92747 370 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 GFI1Q99684 422 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 RDH8Q9NYR8 311 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 RAB22AQ9UL26 194 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 BLOC1S6Q9UL45 172 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 TENM3Q9P273 2699 aa9.5□□□□□ -0.89
SPG11-219ENST00000559822 ANKRD65E5RJM6 399 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 H3BUA1 57 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 FCN1O00602 326 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 FABP7O15540 132 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 CA2P00918 260 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 HSPB1P04792 205 aaKnown RBP9.49□□□□□ -0.89
SPG11-219ENST00000559822 CRHBPP24387 322 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 HSPA13P48723 471 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 CLDN12P56749 244 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 PITPNAQ00169 270 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 FABP5Q01469 135 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 ZNF383Q8NA42 475 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 DRAXINQ8NBI3 349 aaPredicted RBP9.49□□□□□ -0.89
SPG11-219ENST00000559822 LFNGQ8NES3 379 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 DLX4Q92988 240 aaPredicted RBP9.49□□□□□ -0.89
SPG11-219ENST00000559822 RAB3CQ96E17 227 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 CLCC1Q96S66 551 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 SLC35D1Q9NTN3 355 aa9.49□□□□□ -0.89
SPG11-219ENST00000559822 NKX1-2Q9UD57 310 aaPredicted RBP9.49□□□□□ -0.89
SPG11-219ENST00000559822 DNAH9Q9NYC9 4486 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms