RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 RPL39P5Q59GN2 51 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 ZNF660Q6AZW8 331 aaPredicted RBP5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 FAM71F2Q6NXP2 309 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 MZT2BQ6NZ67 158 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 ZNF833PQ6ZTB9 187 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 MOB3BQ86TA1 216 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 CMTM1Q8IZ96 169 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 SLC38A6Q8IZM9 456 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 BCL6BQ8N143 479 aaPredicted RBP5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 OR8H3Q8N146 312 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 ZBTB34Q8NCN2 500 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 TERB2Q8NHR7 220 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 ZFAND1Q8TCF1 268 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 C17orf50Q8WW18 174 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 RTN4IP1Q8WWV3 396 aaPredicted RBP5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 SCGB3A2Q96PL1 93 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 MRPL20Q9BYC9 149 aaKnown RBP5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 OCEL1Q9H607 264 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 CCL28Q9NRJ3 127 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 SDHAF2Q9NX18 166 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 SLC2A8Q9NY64 477 aa5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 C14orf166Q9Y224 244 aaKnown RBP5.34□□□□□ -1.55
CHRNA3-204ENST00000559002 FN1P02751 2386 aaKnown RBP5.34□□□□□ -1.56
CHRNA3-204ENST00000559002 JMJD1CQ15652 2540 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 IGHV1-3A0A0C4DH29 117 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 MDFIC2A0A1B0GVS7 189 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 BTBD17A6NE02 478 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 RNF212BA8MTL3 300 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 LY6LH3BQJ8 138 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 GPR31O00270 319 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 TIMM23O14925 209 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 TNFSF12O43508 249 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 CRLF1O75462 422 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 APOA2P02652 100 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 FAM157CP0CG43 387 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 PAX6P26367 422 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 THBS3P49746 956 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 UCP3P55916 312 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 IFITM3Q01628 133 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 BAMBIQ13145 260 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 CATR1Q13166 79 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 CBX3Q13185 183 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 ASAH1Q13510 395 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 DIAPH2-AS1Q14236 149 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 SURF2Q15527 256 aaPredicted RBP5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 LRRC75BQ2VPJ9 315 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 LDLRAD2Q5SZI1 272 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 AADACL3Q5VUY0 350 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 ZNF66Q6ZN08 573 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 ZNF818PQ6ZRF7 136 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 KCTD9Q7L273 389 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 LHFPL1Q86WI0 220 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 ODF3L1Q8IXM7 274 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 DYNAPQ8N1N2 210 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 DRAM1Q8N682 238 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 SIGLECL1Q8N7X8 197 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 CCDC71LQ8N9Z2 235 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 POC5Q8NA72 575 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 ENKURQ8TC29 256 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 MARCH1Q8TCQ1 289 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 ZNF418Q8TF45 676 aaPredicted RBP5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 TCTEX1D2Q8WW35 142 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 CAPSLQ8WWF8 208 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 ST6GALNAC6Q969X2 333 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 ZNF486Q96H40 463 aaPredicted RBP5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 ADTRPQ96IZ2 230 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 AKR1E2Q96JD6 320 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 SLC25A21Q9BQT8 299 aaPredicted RBP5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 RSRP1Q9BUV0 290 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 DPAGT1Q9H3H5 408 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 PALMDQ9NP74 551 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 GAB2Q9UQC2 676 aa5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 SOX21Q9Y651 276 aaPredicted RBP5.33□□□□□ -1.56
CHRNA3-204ENST00000559002 IGHV3-72A0A0B4J1Y9 119 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 FAM240BA0A1B0GVZ2 78 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 A0A1W2PPI3 338 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 H7C2Y5 167 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 PLA2G10O15496 165 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 RLN1P04808 185 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 CTSDP07339 412 aaPredicted RBP5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 CT45A6P0DMU7 189 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 CT45A5P0DMU8 189 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 CT45A7P0DMV0 189 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 PI3P19957 117 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 GNRHRP30968 328 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 DUTP33316 252 aaKnown RBP5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 RAB13P51153 203 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 CCR6P51684 374 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 TAGLNQ01995 201 aaKnown RBP5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 DCTN2Q13561 401 aaKnown RBP5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 HES1Q14469 280 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 RBMS2Q15434 407 aaKnown RBP5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 AANATQ16613 207 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 RTL8BQ17RB0 113 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 PHLDA2Q53GA4 152 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 C11orf88Q6PI97 169 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 GLDNQ6ZMI3 551 aaPredicted RBP5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 LDLRAD3Q86YD5 345 aa5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 DRAXINQ8NBI3 349 aaPredicted RBP5.32□□□□□ -1.56
CHRNA3-204ENST00000559002 BVESQ8NE79 360 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms