RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 YPEL2Q96QA6 119 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 ABHD14AQ9BUJ0 271 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 PARP12Q9H0J9 701 aaKnown RBP4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 OR51E2Q9H255 320 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 CHMP1AQ9HD42 196 aaPredicted RBP4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 C12orf4Q9NQ89 552 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 RAB22AQ9UL26 194 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 STUB1Q9UNE7 303 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 KCNK7Q9Y2U2 307 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 PLXNB1O43157 2135 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 FGF16O43320 207 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 TXNL1O43396 289 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 LANCL1O43813 399 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 CSF1P09603 554 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 BTF3P20290 206 aaKnown RBP4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 GCSHP23434 173 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 CD1BP29016 333 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 HLA-DRB3P79483 266 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 NEDD8Q15843 81 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 TCTEX1D4Q5JR98 221 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 XP32Q5T750 250 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 C1QL4Q86Z23 238 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 SETD6Q8TBK2 473 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 IL1F10Q8WWZ1 152 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 GALMQ96C23 342 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 CITED2Q99967 270 aaPredicted RBP4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 MRPL20Q9BYC9 149 aaKnown RBP4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 IFI27L2Q9H2X8 130 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 RIMS4Q9H426 269 aaPredicted RBP4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 RNF167Q9H6Y7 350 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 Q9N2K0 584 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 PLSCR3Q9NRY6 295 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 OR1A1Q9P1Q5 309 aa4.76□□□□□ -1.65
CTDSPL2-204ENST00000558966 SAA2-SAA4A0A096LPE2 208 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 IGKV1-6A0A0C4DH72 117 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 MFNGO00587 321 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 RGS11O94810 467 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 MOSP00540 346 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 SCTP09683 121 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 SAA2P0DJI9 122 aaPredicted RBP4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 GADD45AP24522 165 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 RANBP1P43487 201 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 OR3A3P47888 321 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 NSUN5P1Q3KNT7 163 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 C9orf152Q5JTZ5 239 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 Q6ZRM9 215 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 ZNF833PQ6ZTB9 187 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 NDUFA11Q86Y39 141 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 Q8N9W7 124 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 OR2AK2Q8NG84 335 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 OR5AU1Q8NGC0 362 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 OR10R2Q8NGX6 335 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 OR2T10Q8NGZ9 312 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 PTX4Q96A99 478 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 RAB3CQ96E17 227 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 NABP2Q9BQ15 211 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 CMSS1Q9BQ75 279 aaKnown RBP4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 ZNF251Q9BRH9 671 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 CHCHD6Q9BRQ6 235 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 ABRACLQ9P1F3 81 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 SSR3Q9UNL2 185 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 LINC01548A6NM66 108 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 IGHG2P01859 326 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 FCGR3AP08637 254 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 HIST1H1DP16402 221 aaKnown RBP4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 GNB3P16520 340 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 CD36P16671 472 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 SDC2P34741 201 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 SFXN4Q6P4A7 337 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 CENPVQ7Z7K6 275 aaPredicted RBP4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 TPRA1Q86W33 373 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 FAM71E2Q8N5Q1 922 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 NOL4LQ96MY1 436 aaPredicted RBP4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 AGMATQ9BSE5 352 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 CENPOQ9BU64 300 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 ABCG5Q9H222 651 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 DAPK2Q9UIK4 370 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 LINC00527Q9UJ94 153 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 MGAT4AQ9UM21 535 aa4.75□□□□□ -1.65
CTDSPL2-204ENST00000558966 A0A075B6Q4 140 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 LOC100506127A0A0U1RQW1 187 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 LOC102723971A0A1B0GUV8 181 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 NCBP2LA6PVI3 153 aaKnown RBP4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 TRDCB7Z8K6 153 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 ITGB1BP1O14713 200 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 KCNAB3O43448 404 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 PROP1O75360 226 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 OPN1MWP04001 364 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 CD3GP09693 182 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 OPN1MW2P0DN77 364 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 OPN1MW3P0DN78 364 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 CNTFRP26992 372 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 TGFBR1P36897 503 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 GPR12P47775 334 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 F2RL1P55085 397 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 MXD1Q05195 221 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 RPL39P5Q59GN2 51 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 FAM71F2Q6NXP2 309 aa4.74□□□□□ -1.65
CTDSPL2-204ENST00000558966 SLC35E3Q7Z769 313 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms