RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 SEC14L6B5MCN3 397 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 SLC22A1O15245 554 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 NDUFA3O95167 84 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 NAPSAO96009 420 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 UCHL1P09936 223 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 PSMA1P25786 263 aaKnown RBP6.29□□□□□ -1.4
TRAF3-205ENST00000558700 BLVRBP30043 206 aaPredicted RBP6.29□□□□□ -1.4
TRAF3-205ENST00000558700 OR3A3P47888 321 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 HLA-DRB3P79483 266 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 UNC119Q13432 240 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 PLGLAQ15195 96 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 MED22Q15528 200 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 TRAM1Q15629 374 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 C5orf64Q2M2E5 130 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 OR10K2Q6IF99 312 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 FAM131AQ6UXB0 335 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 SETD6Q8TBK2 473 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 UBE2E2Q96LR5 201 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 NICN1Q9BSH3 213 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 URM1Q9BTM9 101 aaKnown RBP6.29□□□□□ -1.4
TRAF3-205ENST00000558700 FAAP24Q9BTP7 215 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 RIMS4Q9H426 269 aaPredicted RBP6.29□□□□□ -1.4
TRAF3-205ENST00000558700 PLGRKTQ9HBL7 147 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 C12orf4Q9NQ89 552 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 LSM2Q9Y333 95 aaKnown RBP6.29□□□□□ -1.4
TRAF3-205ENST00000558700 A0A087WWL8 130 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 TRBV6-6A0A0A6YYG2 114 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 IGHV7-81A0A0B4J1V7 117 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 ZNF785A8K8V0 405 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 PTGES3LE9PB15 166 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 SLC17A2O00624 439 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 ITGB1BP1O14713 200 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 RAB29O14966 203 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 HSPA12AO43301 675 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 RBBP9O75884 186 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 ARL6IP5O75915 188 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 SRMP19623 302 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 CNTFRP26992 372 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 PPIFP30405 207 aaKnown RBP6.28□□□□□ -1.4
TRAF3-205ENST00000558700 INSL3P51460 131 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 UCP3P55916 312 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 QRFPP83859 136 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 NDPQ00604 133 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 RUNX1Q01196 453 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 ZNF616Q08AN1 781 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 ECSCRQ19T08 205 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 LIN54Q6MZP7 749 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 ZNF880Q6PDB4 577 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 CEACAM19Q7Z692 300 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 TCTEX1D1Q8N7M0 179 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 NPBQ8NG41 125 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 OR11H1Q8NG94 326 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 ABHD5Q8WTS1 349 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 CYYR1Q96J86 154 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 ANKRD60Q9BZ19 345 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 GHITMQ9H3K2 345 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 KCNK15Q9H427 330 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 PLEKHJ1Q9NW61 149 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 SLC23A1Q9UHI7 598 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 VSIG4Q9Y279 399 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 WASHC3Q9Y3C0 194 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 TPRKBQ9Y3C4 175 aa6.28□□□□□ -1.4
TRAF3-205ENST00000558700 COL7A1Q02388 2944 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 A0A1W2PN81 502 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 ERICH4A6NGS2 130 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 G3V318 75 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 H0YJW9 148 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 H7C2Y5 167 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 I3L521 148 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 RRHO14718 337 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 RGS10O43665 173 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 SPDEFO95238 335 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 APOA2P02652 100 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 HSMCR30P0CW71 290 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 ARSBP15848 533 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 ZBTB25P24278 435 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 MC5RP33032 325 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 CHRNA7P36544 502 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 CRIP2P52943 208 aaPredicted RBP6.27□□□□□ -1.41
TRAF3-205ENST00000558700 AQP4P55087 323 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 MRPS15P82914 257 aaKnown RBP6.27□□□□□ -1.41
TRAF3-205ENST00000558700 MLLT11Q13015 90 aaPredicted RBP6.27□□□□□ -1.41
TRAF3-205ENST00000558700 IRF3Q14653 427 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 RAB11BQ15907 218 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 ZNF260Q3ZCT1 412 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 RPL39P5Q59GN2 51 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 LIPKQ5VXJ0 399 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 PYHIN1Q6K0P9 492 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 ZNF491Q8N8L2 437 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 NUDT10Q8NFP7 164 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 OR56B1Q8NGI3 324 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 NUDT11Q96G61 164 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 WWC2-AS2Q96NR7 200 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 PRR25Q96S07 402 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 LPAR5Q9H1C0 372 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 GNB4Q9HAV0 340 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 SEPSECSQ9HD40 501 aaKnown RBP6.27□□□□□ -1.41
TRAF3-205ENST00000558700 ISYNA1Q9NPH2 558 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 RNF150Q9ULK6 438 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 HSF4Q9ULV5 492 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms