RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 IGKV1D-8A0A087WSZ0 117 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 TRBV6-7A0A0A0MS04 114 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 A0A1W2PRX2 142 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 OR5H14A6NHG9 310 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 KCNAB3O43448 404 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 SSX5O60225 188 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 TUSC2O75896 110 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 DIRAS3O95661 229 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 EIF4EP06730 217 aaKnown RBP7.15□□□□□ -1.26
SPG11-207ENST00000558138 CSF1P09603 554 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 ZNF182P17025 639 aaPredicted RBP7.15□□□□□ -1.26
SPG11-207ENST00000558138 MC5RP33032 325 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 PRSS3P35030 304 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 LUMP51884 338 aaPredicted RBP7.15□□□□□ -1.26
SPG11-207ENST00000558138 RPS16P62249 146 aaKnown RBP7.15□□□□□ -1.26
SPG11-207ENST00000558138 SLC35B1P78383 322 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 CTF1Q16619 201 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 SRSF7Q16629 238 aaKnown RBP eCLIP7.15□□□□□ -1.26
SPG11-207ENST00000558138 RNASE12Q5GAN4 147 aaKnown RBP7.15□□□□□ -1.26
SPG11-207ENST00000558138 Q6ZS46 218 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 Q8N2B8 174 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 GVQW1Q8N7I0 195 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 OR5AU1Q8NGC0 362 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 OR8H1Q8NGG4 311 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 CITED1Q99966 193 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 SLC35D1Q9NTN3 355 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 LIN7CQ9NUP9 197 aaKnown RBP7.15□□□□□ -1.26
SPG11-207ENST00000558138 WASHC3Q9Y3C0 194 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 STAB1Q9NY15 2570 aa7.15□□□□□ -1.26
SPG11-207ENST00000558138 TCRBV4S1A1TA0A5B7 111 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 PSMB11A5LHX3 300 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 NBR2O15453 112 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 APOA1P02647 267 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 CT45A6P0DMU7 189 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 CT45A5P0DMU8 189 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 CT45A7P0DMV0 189 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 CD28P10747 220 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 TMBIM6P55061 237 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 F2RL1P55085 397 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 FXYD4P59646 89 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 KRTAP10-3P60369 221 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 HERV-K104P61576 105 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 EBI3Q14213 229 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 SPCS2Q15005 226 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 RTL8BQ17RB0 113 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 HIST2H2BDQ6DRA6 164 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 TET2Q6N021 2002 aaPredicted RBP7.14□□□□□ -1.27
SPG11-207ENST00000558138 Q6ZS49 121 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 HOGA1Q86XE5 327 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 H1FOOQ8IZA3 346 aaPredicted RBP7.14□□□□□ -1.27
SPG11-207ENST00000558138 Q8N9W7 124 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.14□□□□□ -1.27
SPG11-207ENST00000558138 OR5H2Q8NGV7 314 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 FAM110DQ8TAY7 271 aaPredicted RBP7.14□□□□□ -1.27
SPG11-207ENST00000558138 CHPT1Q8WUD6 406 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 RBMXL1Q96E39 390 aaKnown RBP7.14□□□□□ -1.27
SPG11-207ENST00000558138 DCUN1D5Q9BTE7 237 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 C6orf62Q9GZU0 229 aaPredicted RBP7.14□□□□□ -1.27
SPG11-207ENST00000558138 PARP11Q9NR21 331 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 SERTAD4Q9NUC0 356 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 EHFQ9NZC4 300 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 EXTL2Q9UBQ6 330 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 ZNF107Q9UII5 783 aaPredicted RBP7.14□□□□□ -1.27
SPG11-207ENST00000558138 LINC00527Q9UJ94 153 aa7.14□□□□□ -1.27
SPG11-207ENST00000558138 H0YJW9 148 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 AP4M1O00189 453 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 RBBP9O75884 186 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 PMP2P02689 132 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 OPN1MWP04001 364 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 OPN1MW2P0DN77 364 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 OPN1MW3P0DN78 364 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 PF4V1P10720 104 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 ELK1P19419 428 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 VDAC1P21796 283 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 CNTFRP26992 372 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 FCGR2CP31995 323 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 THBS3P49746 956 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 TAS2R46P59540 309 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 CDK10Q15131 360 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 TMEM17Q86X19 198 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 PDPNQ86YL7 162 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 Q8N6K4 173 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 ZNF645Q8N7E2 425 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 SECTM1Q8WVN6 248 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 FLYWCH2Q96CP2 140 aaKnown RBP7.13□□□□□ -1.27
SPG11-207ENST00000558138 HARBI1Q96MB7 349 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 CMTM3Q96MX0 182 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 NOL4LQ96MY1 436 aaPredicted RBP7.13□□□□□ -1.27
SPG11-207ENST00000558138 CLCC1Q96S66 551 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 TSNAXQ99598 290 aaKnown RBP7.13□□□□□ -1.27
SPG11-207ENST00000558138 BCL7BQ9BQE9 202 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 AGMATQ9BSE5 352 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 GON7Q9BXV9 100 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 SDHAF2Q9NX18 166 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 PRELID3BQ9Y3B1 194 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 OR2W1Q9Y3N9 320 aa7.13□□□□□ -1.27
SPG11-207ENST00000558138 NUDT19A8MXV4 375 aa7.12□□□□□ -1.27
SPG11-207ENST00000558138 SHOXO15266 292 aa7.12□□□□□ -1.27
SPG11-207ENST00000558138 SLC22A5O76082 557 aa7.12□□□□□ -1.27
SPG11-207ENST00000558138 AMY1AP04745 511 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms