RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 ABHD5Q8WTS1 349 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 AGMATQ9BSE5 352 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 FBXL15Q9H469 300 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 RNF167Q9H6Y7 350 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 AURKAIP1Q9NWT8 199 aaPredicted RBP12.98□□□□□ -0.33
VSX1-207ENST00000557285 ELF5Q9UKW6 265 aaPredicted RBP12.98□□□□□ -0.33
VSX1-207ENST00000557285 RRP15Q9Y3B9 282 aaKnown RBP12.98□□□□□ -0.33
VSX1-207ENST00000557285 WASHC3Q9Y3C0 194 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 A3GALT2U3KPV4 340 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 NOTOA8MTQ0 251 aa12.97□□□□□ -0.33
VSX1-207ENST00000557285 H0YJW9 148 aa12.97□□□□□ -0.33
VSX1-207ENST00000557285 M0R1X1 148 aa12.97□□□□□ -0.33
VSX1-207ENST00000557285 RAB27BO00194 218 aa12.97□□□□□ -0.33
VSX1-207ENST00000557285 MFNGO00587 321 aa12.97□□□□□ -0.33
VSX1-207ENST00000557285 SNRPBP14678 240 aaKnown RBP12.97□□□□□ -0.33
VSX1-207ENST00000557285 HOXD3P31249 432 aaPredicted RBP12.97□□□□□ -0.33
VSX1-207ENST00000557285 FGF9P31371 208 aaPredicted RBP12.97□□□□□ -0.33
VSX1-207ENST00000557285 FOXE3Q13461 319 aa12.97□□□□□ -0.33
VSX1-207ENST00000557285 LIN54Q6MZP7 749 aa12.97□□□□□ -0.33
VSX1-207ENST00000557285 OR4A4PQ8NGN8 299 aa12.97□□□□□ -0.33
VSX1-207ENST00000557285 RCC1LQ96I51 464 aaKnown RBP12.97□□□□□ -0.33
VSX1-207ENST00000557285 CLCC1Q96S66 551 aa12.97□□□□□ -0.33
VSX1-207ENST00000557285 IGHV7-81A0A0B4J1V7 117 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 OR5H14A6NHG9 310 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 ITGB1BP1O14713 200 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 CLEC2LP0C7M8 214 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 OR8U9P0C7N5 309 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 SDC2P34741 201 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 KIR2DS1Q14954 304 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 ECSCRQ19T08 205 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 OR8U1Q8NH10 309 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 OR10J5Q8NHC4 309 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 RAX2Q96IS3 184 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 OR2D2Q9H210 308 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 OR51J1Q9H342 316 aa12.96□□□□□ -0.33
VSX1-207ENST00000557285 RBM7Q9Y580 266 aaKnown RBP12.96□□□□□ -0.33
VSX1-207ENST00000557285 DNAH3Q8TD57 4116 aa12.96□□□□□ -0.34
VSX1-207ENST00000557285 TRAV41A0A0B4J266 112 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 CCL24O00175 119 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 RRHO14718 337 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 IGHG4P01861 327 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 HLA-DRB1P01911 266 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 IGF1P05019 195 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 ELANEP08246 267 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 OR5H8P0DN80 308 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 MC5RP33032 325 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 MYCNOSP40205 109 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 CFHR3Q02985 330 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 TMEM65Q6PI78 240 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 REC114Q7Z4M0 266 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 ZNF383Q8NA42 475 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 NPBQ8NG41 125 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 LGALS14Q8TCE9 139 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 PTX4Q96A99 478 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 OR5B12Q96R08 314 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 GINS4Q9BRT9 223 aa12.95□□□□□ -0.34
VSX1-207ENST00000557285 J3QRK9 145 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 PROP1O75360 226 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 NDUFA3O95167 84 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 APOA2P02652 100 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 IGKV1-16P04430 117 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 TFAP2AP05549 437 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 CD36P16671 472 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 SERPINB10P48595 397 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 NDPQ00604 133 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 CDNFQ49AH0 187 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 SFXN4Q6P4A7 337 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 OR5AN1Q8NGI8 311 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 CASTOR1Q8WTX7 329 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 CABLES2Q9BTV7 478 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 ST6GALNAC5Q9BVH7 336 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 KLK15Q9H2R5 256 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 GHITMQ9H3K2 345 aa12.94□□□□□ -0.34
VSX1-207ENST00000557285 METTL1Q9UBP6 276 aaKnown RBP12.94□□□□□ -0.34
VSX1-207ENST00000557285 IGKV1D-8A0A087WSZ0 117 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 FCN1O00602 326 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 PSMB8P28062 276 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 SLC6A1P30531 599 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 KRTAP10-11P60412 298 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 RPS16P62249 146 aaKnown RBP12.93□□□□□ -0.34
VSX1-207ENST00000557285 KCTD21Q4G0X4 260 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 IDNKQ5T6J7 187 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 TPRA1Q86W33 373 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 NUDCD2Q8WVJ2 157 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 DPF1Q92782 380 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 P2RX4Q99571 388 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 CENPOQ9BU64 300 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 SLC35D1Q9NTN3 355 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 GAB2Q9UQC2 676 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 FBXO7Q9Y3I1 522 aa12.93□□□□□ -0.34
VSX1-207ENST00000557285 TRBV6-7A0A0A0MS04 114 aa12.92□□□□□ -0.34
VSX1-207ENST00000557285 A0A1W2PN81 502 aa12.92□□□□□ -0.34
VSX1-207ENST00000557285 TMEM235A6NFC5 223 aa12.92□□□□□ -0.34
VSX1-207ENST00000557285 RBBP9O75884 186 aa12.92□□□□□ -0.34
VSX1-207ENST00000557285 DUS4LO95620 317 aaKnown RBP12.92□□□□□ -0.34
VSX1-207ENST00000557285 CHRNA7P36544 502 aa12.92□□□□□ -0.34
VSX1-207ENST00000557285 CDX1P47902 265 aaPredicted RBP12.92□□□□□ -0.34
VSX1-207ENST00000557285 CX3CL1P78423 397 aa12.92□□□□□ -0.34
VSX1-207ENST00000557285 PSG5Q15238 335 aa12.92□□□□□ -0.34
VSX1-207ENST00000557285 RNF152Q8N8N0 203 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms