RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 KIAA1456Q9P272 454 aa11.22□□□□□ -0.61
SLIRP-207ENST00000556831 hCG_2014768A0A024R1R8 64 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 A0A0A6YYH2 397 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 A6NJ64 397 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 DIRAS3O95661 229 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 OPN1MWP04001 364 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 OPN1MW2P0DN77 364 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 OPN1MW3P0DN78 364 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 OR3A3P47888 321 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 BCAP31P51572 246 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 SLC35B1P78383 322 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 EBI3Q14213 229 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 PNLIPRP3Q17RR3 467 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 KHDC1LQ5JSQ8 128 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 Q6ZPA2 131 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 OR5AU1Q8NGC0 362 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 MAFIPQ8WZ33 124 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 KRTAP17-1Q9BYP8 105 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.21□□□□□ -0.61
SLIRP-207ENST00000556831 RDH8Q9NYR8 311 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 ZNF230Q9UIE0 474 aaPredicted RBP11.21□□□□□ -0.61
SLIRP-207ENST00000556831 KCNK7Q9Y2U2 307 aa11.21□□□□□ -0.61
SLIRP-207ENST00000556831 PRKDCP78527 4128 aaKnown RBP11.2□□□□□ -0.62
SLIRP-207ENST00000556831 PSMB11A5LHX3 300 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 TMEM235A6NFC5 223 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 OR5H14A6NHG9 310 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 H7C2Y5 167 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 APOA2P02652 100 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 MC5RP33032 325 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 CBX3Q13185 183 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 OXA1LQ15070 435 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 SRSF7Q16629 238 aaKnown RBP eCLIP11.2□□□□□ -0.62
SLIRP-207ENST00000556831 NSUN5P1Q3KNT7 163 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 ODF3L1Q8IXM7 274 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 FAM110DQ8TAY7 271 aaPredicted RBP11.2□□□□□ -0.62
SLIRP-207ENST00000556831 ABHD14BQ96IU4 210 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 NABP2Q9BQ15 211 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 CABLES2Q9BTV7 478 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 ST6GALNAC5Q9BVH7 336 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 GON7Q9BXV9 100 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 WNT10AQ9GZT5 417 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 C11orf54Q9H0W9 315 aaPredicted RBP11.2□□□□□ -0.62
SLIRP-207ENST00000556831 SPATA2Q9UM82 520 aa11.2□□□□□ -0.62
SLIRP-207ENST00000556831 TRAV18A0A075B6X5 111 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 ZNF736B4DX44 427 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-207ENST00000556831 AMY1AP04745 511 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 AMY2AP04746 511 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 CTXN2P0C2S0 81 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 GSTT2P0CG29 244 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 GSTT2BP0CG30 244 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 CD28P10747 220 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 ARPC4P59998 168 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 ACTBP60709 375 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 VBP1P61758 197 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 PLGLAQ15195 96 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 RPL39P5Q59GN2 51 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 IGSF11Q5DX21 431 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 UBE2NLQ5JXB2 153 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 NDUFA11Q86Y39 141 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 Q8N6K4 173 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-207ENST00000556831 OR4F17Q8NGA8 305 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 NUDCD2Q8WVJ2 157 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 S100A16Q96FQ6 103 aaKnown RBP11.19□□□□□ -0.62
SLIRP-207ENST00000556831 OR4F4Q96R69 305 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 CCDC32Q9BV29 185 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 SLIRPQ9GZT3 109 aaKnown RBP11.19□□□□□ -0.62
SLIRP-207ENST00000556831 NXF2Q9GZY0 626 aaKnown RBP11.19□□□□□ -0.62
SLIRP-207ENST00000556831 OR2D2Q9H210 308 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 RNF150Q9ULK6 438 aa11.19□□□□□ -0.62
SLIRP-207ENST00000556831 TCRBV4S1A1TA0A5B7 111 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 AP4M1O00189 453 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 PTTG1O95997 202 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 APOA1P02647 267 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 TGFBR1P36897 503 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 RPS19P39019 145 aaKnown RBP11.18□□□□□ -0.62
SLIRP-207ENST00000556831 SPANXN2Q5MJ10 180 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 FAM131AQ6UXB0 335 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 Q6ZS49 121 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 MFSD4AQ8N468 514 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 SAMD12Q8N8I0 201 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 OR5H6Q8NGV6 325 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 SLC25A46Q96AG3 418 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 KCTD12Q96CX2 325 aaKnown RBP11.18□□□□□ -0.62
SLIRP-207ENST00000556831 CITED2Q99967 270 aaPredicted RBP11.18□□□□□ -0.62
SLIRP-207ENST00000556831 PARP12Q9H0J9 701 aaKnown RBP11.18□□□□□ -0.62
SLIRP-207ENST00000556831 ABCG5Q9H222 651 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 WASHC3Q9Y3C0 194 aa11.18□□□□□ -0.62
SLIRP-207ENST00000556831 TRBV6-7A0A0A0MS04 114 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 IGKV1-6A0A0C4DH72 117 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 A0A1W2PRX2 142 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 J3QRK9 145 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 M0R1X1 148 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 NBR2O15453 112 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 RBBP9O75884 186 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 TSPAN15O95858 294 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 IGHG2P01859 326 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 OR8U9P0C7N5 309 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 PF4V1P10720 104 aa11.17□□□□□ -0.62
SLIRP-207ENST00000556831 VDAC1P21796 283 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms