RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 FUNDC2Q9BWH2 189 aa8.17□□□□□ -1.1
SNX6-208ENST00000556712 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.17□□□□□ -1.1
SNX6-208ENST00000556712 ZNF107Q9UII5 783 aaPredicted RBP8.17□□□□□ -1.1
SNX6-208ENST00000556712 TSSC4Q9Y5U2 329 aaPredicted RBP8.17□□□□□ -1.1
SNX6-208ENST00000556712 ETV7Q9Y603 341 aa8.17□□□□□ -1.1
SNX6-208ENST00000556712 OR5H14A6NHG9 310 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 G3V4G9 280 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 H7C2Y5 167 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 J3QRK9 145 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 M0R1X1 148 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 AP4M1O00189 453 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 WIPF1O43516 503 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 GSTP1P09211 210 aaKnown RBP8.16□□□□□ -1.1
SNX6-208ENST00000556712 PTHLHP12272 177 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 SOX6P35712 828 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 RPS19P39019 145 aaKnown RBP8.16□□□□□ -1.1
SNX6-208ENST00000556712 SERPINB10P48595 397 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 NDPQ00604 133 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 ZNF383Q8NA42 475 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 OR4F17Q8NGA8 305 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 OR10J5Q8NHC4 309 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 PHF21AQ96BD5 680 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 OR4F4Q96R69 305 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 GINS4Q9BRT9 223 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 ST6GALNAC5Q9BVH7 336 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 NAA50Q9GZZ1 169 aaKnown RBP8.16□□□□□ -1.1
SNX6-208ENST00000556712 TOLLIPQ9H0E2 274 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 FBXL15Q9H469 300 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 PARP11Q9NR21 331 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 ZNF221Q9UK13 617 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 WASHC3Q9Y3C0 194 aa8.16□□□□□ -1.1
SNX6-208ENST00000556712 TRAV18A0A075B6X5 111 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 IGHV7-81A0A0B4J1V7 117 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 MEIS3P1A6NDR6 274 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 ATP6V0E1O15342 81 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 SCGNO76038 276 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 NDUFA3O95167 84 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 IGKV1-16P04430 117 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 TFAP2AP05549 437 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 FCER2P06734 321 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 NFYAP23511 347 aaPredicted RBP8.15□□□□□ -1.1
SNX6-208ENST00000556712 SCAND1P57086 179 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 VBP1P61758 197 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 RPL23AP62750 156 aaKnown RBP8.15□□□□□ -1.1
SNX6-208ENST00000556712 SLC35B1P78383 322 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 ARL6IP1Q15041 203 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 C5orf64Q2M2E5 130 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 Q6ZS49 121 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 C8orf86Q6ZUL3 223 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 H1FOOQ8IZA3 346 aaPredicted RBP8.15□□□□□ -1.1
SNX6-208ENST00000556712 GVQW1Q8N7I0 195 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 OR5AN1Q8NGI8 311 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 OR13F1Q8NGS4 319 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 SDHAF2Q9NX18 166 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 KIAA1456Q9P272 454 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 SPATA2Q9UM82 520 aa8.15□□□□□ -1.1
SNX6-208ENST00000556712 RBM7Q9Y580 266 aaKnown RBP8.15□□□□□ -1.1
SNX6-208ENST00000556712 NUDT19A8MXV4 375 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 G3V318 75 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 RRHO14718 337 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 RRP9O43818 475 aaKnown RBP8.14□□□□□ -1.11
SNX6-208ENST00000556712 HLA-DRB1P01911 266 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 APOA2P02652 100 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 PF4P02776 101 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 RPLP1P05386 114 aaKnown RBP8.14□□□□□ -1.11
SNX6-208ENST00000556712 VDAC1P21796 283 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 CFHR3Q02985 330 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 PLGLAQ15195 96 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 SRSF7Q16629 238 aaKnown RBP eCLIP8.14□□□□□ -1.11
SNX6-208ENST00000556712 PNLIPRP3Q17RR3 467 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 ETV3LQ6ZN32 361 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 SAMD12Q8N8I0 201 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 KLHL30-AS1Q8NEE0 82 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 NPBQ8NG41 125 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 CLCC1Q96S66 551 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 TPSG1Q9NRR2 321 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 SLC35D1Q9NTN3 355 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 GAB2Q9UQC2 676 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 FBXO7Q9Y3I1 522 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 WSB1Q9Y6I7 421 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 A3GALT2U3KPV4 340 aa8.14□□□□□ -1.11
SNX6-208ENST00000556712 IGKV1D-13A0A0B4J2D9 117 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 DIRAS3O95661 229 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 PRB2P02812 416 aaPredicted RBP8.13□□□□□ -1.11
SNX6-208ENST00000556712 IGKV1-13P0DP09 117 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 MC5RP33032 325 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 PITPNAQ00169 270 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 PSG5Q15238 335 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 ECSCRQ19T08 205 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 DEFB136Q30KP8 78 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 OXLD1Q5BKU9 147 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 UBE2NLQ5JXB2 153 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 SAMD5Q5TGI4 173 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 LIN54Q6MZP7 749 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 PDPNQ86YL7 162 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.13□□□□□ -1.11
SNX6-208ENST00000556712 SLC25A46Q96AG3 418 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 DUX3Q96PT4 197 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 OR51J1Q9H342 316 aa8.13□□□□□ -1.11
SNX6-208ENST00000556712 GHITMQ9H3K2 345 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms