RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 R3HDM4Q96D70 268 aa9.1□□□□□ -0.95
SLIRP-206ENST00000556375 RBMXL1Q96E39 390 aaKnown RBP9.1□□□□□ -0.95
SLIRP-206ENST00000556375 GINS4Q9BRT9 223 aa9.1□□□□□ -0.95
SLIRP-206ENST00000556375 DCSTAMPQ9H295 470 aa9.1□□□□□ -0.95
SLIRP-206ENST00000556375 ZNF580Q9UK33 172 aa9.1□□□□□ -0.95
SLIRP-206ENST00000556375 SPATA2Q9UM82 520 aa9.1□□□□□ -0.95
SLIRP-206ENST00000556375 WASHC3Q9Y3C0 194 aa9.1□□□□□ -0.95
SLIRP-206ENST00000556375 IGKV1D-8A0A087WSZ0 117 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 A0A1W2PRX2 142 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 TCRBV4S1A1TA0A5B7 111 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 PROP1O75360 226 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 RBBP9O75884 186 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 NDUFA3O95167 84 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 HLA-DRB1P01911 266 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 TFAP2AP05549 437 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 MC5RP33032 325 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 RPS19P39019 145 aaKnown RBP9.09□□□□□ -0.95
SLIRP-206ENST00000556375 LSM3P62310 102 aaKnown RBP9.09□□□□□ -0.95
SLIRP-206ENST00000556375 C5orf64Q2M2E5 130 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 KHDC1LQ5JSQ8 128 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 GLDNQ6ZMI3 551 aaPredicted RBP9.09□□□□□ -0.95
SLIRP-206ENST00000556375 ZNF329Q86UD4 541 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 COMMD1Q8N668 190 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 NPBQ8NG41 125 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 HSPB9Q9BQS6 159 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 FUNDC2Q9BWH2 189 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 GON7Q9BXV9 100 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 OR2D2Q9H210 308 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 KIAA1456Q9P272 454 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 ZNF107Q9UII5 783 aaPredicted RBP9.09□□□□□ -0.95
SLIRP-206ENST00000556375 LINC00527Q9UJ94 153 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 RNF150Q9ULK6 438 aa9.09□□□□□ -0.95
SLIRP-206ENST00000556375 NOTCH3Q9UM47 2321 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 TRAV18A0A075B6X5 111 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 LINC01548A6NM66 108 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 H7C2Y5 167 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 SSX5O60225 188 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 APOA2P02652 100 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 CTXN2P0C2S0 81 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 OR8U9P0C7N5 309 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 CNTFRP26992 372 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 NCS1P62166 190 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 PDPNQ86YL7 162 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 H1FOOQ8IZA3 346 aaPredicted RBP9.08□□□□□ -0.96
SLIRP-206ENST00000556375 OR8U1Q8NH10 309 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 SLC25A46Q96AG3 418 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 RITA1Q96K30 269 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 RNF5Q99942 180 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 DIABLOQ9NR28 239 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 GAB2Q9UQC2 676 aa9.08□□□□□ -0.96
SLIRP-206ENST00000556375 M0R1X1 148 aa9.07□□□□□ -0.96
SLIRP-206ENST00000556375 SPDEFO95238 335 aa9.07□□□□□ -0.96
SLIRP-206ENST00000556375 IGF1P05019 195 aa9.07□□□□□ -0.96
SLIRP-206ENST00000556375 PF4V1P10720 104 aa9.07□□□□□ -0.96
SLIRP-206ENST00000556375 CFHR3Q02985 330 aa9.07□□□□□ -0.96
SLIRP-206ENST00000556375 UBE2NLQ5JXB2 153 aa9.07□□□□□ -0.96
SLIRP-206ENST00000556375 CNIH2Q6PI25 160 aa9.07□□□□□ -0.96
SLIRP-206ENST00000556375 ZNF383Q8NA42 475 aa9.07□□□□□ -0.96
SLIRP-206ENST00000556375 DRAXINQ8NBI3 349 aaPredicted RBP9.07□□□□□ -0.96
SLIRP-206ENST00000556375 KCTD12Q96CX2 325 aaKnown RBP9.07□□□□□ -0.96
SLIRP-206ENST00000556375 ST6GALNAC5Q9BVH7 336 aa9.07□□□□□ -0.96
SLIRP-206ENST00000556375 MRPS26Q9BYN8 205 aaKnown RBP9.07□□□□□ -0.96
SLIRP-206ENST00000556375 AUNIPQ9H7T9 357 aa9.07□□□□□ -0.96
SLIRP-206ENST00000556375 SDHAF2Q9NX18 166 aa9.07□□□□□ -0.96
SLIRP-206ENST00000556375 ANXA10Q9UJ72 324 aa9.07□□□□□ -0.96
SLIRP-206ENST00000556375 RBM7Q9Y580 266 aaKnown RBP9.07□□□□□ -0.96
SLIRP-206ENST00000556375 IGHV7-81A0A0B4J1V7 117 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 RRHO14718 337 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 GABARAPO95166 117 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 IGKV1-16P04430 117 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 OR5H8P0DN80 308 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 VDAC1P21796 283 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 SLC6A1P30531 599 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 VBP1P61758 197 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 RPL23AP62750 156 aaKnown RBP9.06□□□□□ -0.96
SLIRP-206ENST00000556375 FOXE3Q13461 319 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 TEX38Q6PEX7 206 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 SAMD12Q8N8I0 201 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 C5orf30Q96GV9 206 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 TSNAXQ99598 290 aaKnown RBP9.06□□□□□ -0.96
SLIRP-206ENST00000556375 OR51J1Q9H342 316 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 SLC35D1Q9NTN3 355 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 ZFP57Q9NU63 452 aa9.06□□□□□ -0.96
SLIRP-206ENST00000556375 ATP6V0E1O15342 81 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 XRCC3O43542 346 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 IGHG4P01861 327 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 PF4P02776 101 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 ELANEP08246 267 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 CBX5P45973 191 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 THBS3P49746 956 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 LINC00205P59089 165 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 NDPQ00604 133 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 TAGLNQ01995 201 aaKnown RBP9.05□□□□□ -0.96
SLIRP-206ENST00000556375 PLGLAQ15195 96 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 CXorf66Q5JRM2 361 aaPredicted RBP9.05□□□□□ -0.96
SLIRP-206ENST00000556375 LIN54Q6MZP7 749 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 HOGA1Q86XE5 327 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 ANKRD13BQ86YJ7 626 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 RNF152Q8N8N0 203 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 BEST4Q8NFU0 473 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms