RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 TBC1D26Q86UD7 250 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 DRAM1Q8N682 238 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 ADAD2Q8NCV1 583 aaKnown RBP7.52□□□□□ -1.21
ACTN1-218ENST00000556343 LHX4Q969G2 390 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 MRGPRFQ96AM1 343 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 RPEQ96AT9 228 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 ABHD14BQ96IU4 210 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 AIFM2Q9BRQ8 373 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 AGMATQ9BSE5 352 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 BEX2Q9BXY8 128 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 IFI27L2Q9H2X8 130 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 BEX1Q9HBH7 125 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 FAM212BQ9NTI7 297 aaPredicted RBP7.52□□□□□ -1.21
ACTN1-218ENST00000556343 NOTCH2Q04721 2471 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 C3orf85A0A1B0GTC6 90 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 C9orf170A2RU37 121 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 SLC31A2O15432 143 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 TNFSF12O43508 249 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 SSNA1O43805 119 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 DUS4LO95620 317 aaKnown RBP7.51□□□□□ -1.21
ACTN1-218ENST00000556343 IGLV1-47P01700 117 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 HLA-AP01891 365 aaKnown RBP7.51□□□□□ -1.21
ACTN1-218ENST00000556343 APOA2P02652 100 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 RPA2P15927 270 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 ZNF16P17020 682 aaPredicted RBP7.51□□□□□ -1.21
ACTN1-218ENST00000556343 HOXB4P17483 251 aaPredicted RBP7.51□□□□□ -1.21
ACTN1-218ENST00000556343 F2RP25116 425 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 MC5RP33032 325 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 ZNF137PP52743 207 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 PPP1R1AQ13522 171 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 RTL8BQ17RB0 113 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 LIN54Q6MZP7 749 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 TGIF2LXQ8IUE1 241 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 MAPK1IP1LQ8NDC0 245 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 ZNF431Q8TF32 576 aaPredicted RBP7.51□□□□□ -1.21
ACTN1-218ENST00000556343 TCTEX1D2Q8WW35 142 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 MALSU1Q96EH3 234 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 GALNT14Q96FL9 552 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 TBX15Q96SF7 602 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 PARP12Q9H0J9 701 aaKnown RBP7.51□□□□□ -1.21
ACTN1-218ENST00000556343 MED28Q9H204 178 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 OR51J1Q9H342 316 aa7.51□□□□□ -1.21
ACTN1-218ENST00000556343 PRRC2AP48634 2157 aaKnown RBP7.51□□□□□ -1.21
ACTN1-218ENST00000556343 MED13LQ71F56 2210 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 ITPR2Q14571 2701 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 SAA2-SAA4A0A096LPE2 208 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 A0A0B4J2A0 478 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 H0Y980 276 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 NPFFO15130 113 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 IFNA21P01568 189 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 SAA2P0DJI9 122 aaPredicted RBP7.5□□□□□ -1.21
ACTN1-218ENST00000556343 DUTP33316 252 aaKnown RBP7.5□□□□□ -1.21
ACTN1-218ENST00000556343 RAB13P51153 203 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 ZNF816Q0VGE8 651 aaPredicted RBP7.5□□□□□ -1.21
ACTN1-218ENST00000556343 DHRS2Q13268 280 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 RPL39P5Q59GN2 51 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 TPTE2P1Q5T6R2 138 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 DHRS7BQ6IAN0 325 aaPredicted RBP7.5□□□□□ -1.21
ACTN1-218ENST00000556343 FAM53AQ6NSI3 398 aaPredicted RBP7.5□□□□□ -1.21
ACTN1-218ENST00000556343 ZNF833PQ6ZTB9 187 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 MOB3BQ86TA1 216 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 LDLRAD3Q86YD5 345 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 ZNF695Q8IW36 515 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 LGI3Q8N145 548 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 OR8H3Q8N146 312 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 C12orf45Q8N5I9 185 aaPredicted RBP7.5□□□□□ -1.21
ACTN1-218ENST00000556343 UXS1Q8NBZ7 420 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 OR4P4Q8NGL7 312 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 OR51H1Q8NH63 302 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 NANPQ8TBE9 248 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 CASTOR1Q8WTX7 329 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 IL22RA2Q969J5 263 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 SHPKQ9UHJ6 478 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 FAM96BQ9Y3D0 163 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 ALG5Q9Y673 324 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 CCDC168Q8NDH2 2452 aa7.5□□□□□ -1.21
ACTN1-218ENST00000556343 YLPM1P49750 1951 aaKnown RBP7.5□□□□□ -1.21
ACTN1-218ENST00000556343 VPS13CQ709C8 3753 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 A0A0A6YYJ9 748 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 IGHV1-69DA0A0B4J2H0 117 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 CENPVL3A0A0U1RRI6 287 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 DUXBA0A1W2PPF3 345 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 C7orf66A4D0T2 115 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 ODF3BA8MYP8 253 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 RNASEK-C17orf49H0YIS7 233 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 CD5LO43866 347 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 FCGR3BO75015 233 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 IGHV1-69P01742 117 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 OR5AC1P0C628 307 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 VSIG10L2P0DP72 767 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 HNF1AP20823 631 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 BRS3P32247 399 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 ERVK-16P61578 105 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 KLRD1Q13241 179 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 SCGB2A2Q13296 93 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 SLC9A3R2Q15599 337 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 HCP5Q6MZN7 132 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 LIAT1Q6ZQX7 453 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 ODF3L1Q8IXM7 274 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 PDZD9Q8IXQ8 264 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms