RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 NUDT19A8MXV4 375 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 NDUFA2O43678 99 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 SCGB1D2O95969 90 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 CYB5R3P00387 301 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-235ENST00000556082 IGKV1-39P01597 117 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 IGKV1-5P01602 117 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 TFF1P04155 84 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 IGKV1D-39P04432 117 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 P0C879 139 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 FAM157CP0CG43 387 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 CD80P33681 288 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 PPP1CCP36873 323 aaKnown RBP6.86□□□□□ -1.31
ATXN3-235ENST00000556082 RAB7AP51149 207 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 ARHGDIBP52566 201 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 TAS2R30P59541 319 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 MEF2CQ06413 473 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-235ENST00000556082 EDDM3AQ14507 147 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 AANATQ16613 207 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 C17orf58Q2M2W7 97 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 CXorf66Q5JRM2 361 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-235ENST00000556082 ADAM5Q6NVV9 412 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 FOXRED2Q8IWF2 684 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 OR2C3Q8N628 320 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 TPRX1Q8N7U7 411 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-235ENST00000556082 SAT2Q96F10 170 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-235ENST00000556082 RAB40CQ96S21 281 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 GPHA2Q96T91 129 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 DCTN5Q9BTE1 182 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 KRTAP4-11Q9BYQ6 195 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 OR2D2Q9H210 308 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 BARX1Q9HBU1 254 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-235ENST00000556082 KCNJ16Q9NPI9 418 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 ZC4H2Q9NQZ6 224 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 LYRM2Q9NU23 88 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-235ENST00000556082 SDHAF2Q9NX18 166 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 TAS2R3Q9NYW6 316 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 CALYQ9NYX4 217 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 KAAG1Q9UBP8 84 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 FBXL17Q9UF56 701 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 RNF150Q9ULK6 438 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 MMP24Q9Y5R2 645 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 PIEZO2Q9H5I5 2752 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 PPIAL4EA0A075B759 164 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 A0A0G2JRQ6 117 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 hADV38S2A0JD32 116 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 NKX6-3A6NJ46 265 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 A8MXK9 166 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 PPIAL4DF5H284 164 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 TOR1AO14656 332 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 RBFOX2O43251 390 aaKnown RBP eCLIP6.85□□□□□ -1.31
ATXN3-235ENST00000556082 CLDN1O95832 211 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 FGF2P09038 288 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 SEC11BP0C7V7 166 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 PPIAL4FP0DN26 164 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 LOXP28300 417 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-235ENST00000556082 LPAR6P43657 344 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 ERVFRD-1P60508 538 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 POLR2GP62487 172 aaKnown RBP eCLIP6.85□□□□□ -1.31
ATXN3-235ENST00000556082 VAMP2P63027 116 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 CCL8P80075 99 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 SRSF3P84103 164 aaKnown RBP6.85□□□□□ -1.31
ATXN3-235ENST00000556082 BAXQ07812 192 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 Q3ZCU0 254 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 RPL7L1Q6DKI1 246 aaKnown RBP6.85□□□□□ -1.31
ATXN3-235ENST00000556082 Q6ZRM9 215 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 FGFRL1Q8N441 504 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 TMEM252Q8N6L7 170 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 RFESDQ8TAC1 157 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 UBALD1Q8TB05 177 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 C5orf30Q96GV9 206 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 SMIM8Q96KF7 97 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 CCL13Q99616 98 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 GINS3Q9BRX5 216 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 SAP30LQ9HAJ7 183 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 TMEM106BQ9NUM4 274 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 GFOD1Q9NXC2 390 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 GNG12Q9UBI6 72 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 LPAR3Q9UBY5 353 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 CACFD1Q9UGQ2 172 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 PPIAL4AQ9Y536 164 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 WSB1Q9Y6I7 421 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 ASPMQ8IZT6 3477 aa6.85□□□□□ -1.31
ATXN3-235ENST00000556082 DMXL2Q8TDJ6 3036 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 IGF2RP11717 2491 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 RAB19A4D1S5 217 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 FAM90A27PA6NNH2 459 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 FAM90A9PA6NNJ1 464 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 DEFB108AA8MXU0 73 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 SHOXO15266 292 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 CHST1O43916 411 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 PROP1O75360 226 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 CLDN14O95500 239 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 LY86O95711 162 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 TMEM50AO95807 157 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 GYPAP02724 150 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 AGAP20933 346 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 DUTP33316 252 aaKnown RBP6.84□□□□□ -1.31
ATXN3-235ENST00000556082 KIR2DS2P43631 304 aa6.84□□□□□ -1.31
ATXN3-235ENST00000556082 GPR12P47775 334 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms