RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ZNF383Q8NA42 475 aa10.75□□□□□ -0.69
SNX6-203ENST00000555416 OR5AN1Q8NGI8 311 aa10.75□□□□□ -0.69
SNX6-203ENST00000555416 OR13F1Q8NGS4 319 aa10.75□□□□□ -0.69
SNX6-203ENST00000555416 OR8U1Q8NH10 309 aa10.75□□□□□ -0.69
SNX6-203ENST00000555416 CHPT1Q8WUD6 406 aa10.75□□□□□ -0.69
SNX6-203ENST00000555416 NAA50Q9GZZ1 169 aaKnown RBP10.75□□□□□ -0.69
SNX6-203ENST00000555416 VCX3AQ9NNX9 186 aa10.75□□□□□ -0.69
SNX6-203ENST00000555416 ETV7Q9Y603 341 aa10.75□□□□□ -0.69
SNX6-203ENST00000555416 NOTCH3Q9UM47 2321 aa10.75□□□□□ -0.69
SNX6-203ENST00000555416 PLXNB1O43157 2135 aa10.75□□□□□ -0.69
SNX6-203ENST00000555416 G3V4G9 280 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 M0R1X1 148 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 NBR2O15453 112 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 NDUFA3O95167 84 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 IGKV1-16P04430 117 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 GSTP1P09211 210 aaKnown RBP10.74□□□□□ -0.69
SNX6-203ENST00000555416 SOX6P35712 828 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 SCAND1P57086 179 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 VBP1P61758 197 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 NDPQ00604 133 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 SRSF7Q16629 238 aaKnown RBP eCLIP10.74□□□□□ -0.69
SNX6-203ENST00000555416 C5orf64Q2M2E5 130 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 TIMM50Q3ZCQ8 353 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 KHDC1LQ5JSQ8 128 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 NPBQ8NG41 125 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 OR4X2Q8NGF9 303 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 OR10J5Q8NHC4 309 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 PHF21AQ96BD5 680 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 OR2D2Q9H210 308 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 SDHAF2Q9NX18 166 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 ZNF221Q9UK13 617 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 SPATA2Q9UM82 520 aa10.74□□□□□ -0.69
SNX6-203ENST00000555416 TSSC4Q9Y5U2 329 aaPredicted RBP10.74□□□□□ -0.69
SNX6-203ENST00000555416 IGHV7-81A0A0B4J1V7 117 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 OR5H14A6NHG9 310 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 J3QRK9 145 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 AP4M1O00189 453 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 FCN1O00602 326 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 FCER2P06734 321 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 SERPINB10P48595 397 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 CFHR3Q02985 330 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 FOXRED2Q8IWF2 684 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 GVQW1Q8N7I0 195 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 FBXL15Q9H469 300 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 WASHC3Q9Y3C0 194 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 FBXO7Q9Y3I1 522 aa10.73□□□□□ -0.69
SNX6-203ENST00000555416 G3V318 75 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 H7C2Y5 167 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 RRHO14718 337 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 ATP6V0E1O15342 81 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 RRP9O43818 475 aaKnown RBP10.72□□□□□ -0.69
SNX6-203ENST00000555416 DIRAS3O95661 229 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 HLA-DRB1P01911 266 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 RPLP1P05386 114 aaKnown RBP10.72□□□□□ -0.69
SNX6-203ENST00000555416 TFAP2AP05549 437 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 NFYAP23511 347 aaPredicted RBP10.72□□□□□ -0.69
SNX6-203ENST00000555416 GNG2P59768 71 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 RPL23AP62750 156 aaKnown RBP10.72□□□□□ -0.69
SNX6-203ENST00000555416 ARL6IP1Q15041 203 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 PNLIPRP3Q17RR3 467 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 ETV3LQ6ZN32 361 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 OR4F17Q8NGA8 305 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 OR4F4Q96R69 305 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 GINS4Q9BRT9 223 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 DCSTAMPQ9H295 470 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 GHITMQ9H3K2 345 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 AUNIPQ9H7T9 357 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 TPSG1Q9NRR2 321 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 GAB2Q9UQC2 676 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 WSB1Q9Y6I7 421 aa10.72□□□□□ -0.69
SNX6-203ENST00000555416 IGKV1D-13A0A0B4J2D9 117 aa10.71□□□□□ -0.69
SNX6-203ENST00000555416 SCGNO76038 276 aa10.71□□□□□ -0.69
SNX6-203ENST00000555416 IGF1P05019 195 aa10.71□□□□□ -0.69
SNX6-203ENST00000555416 IGKV1-13P0DP09 117 aa10.71□□□□□ -0.69
SNX6-203ENST00000555416 EGR2P11161 476 aaPredicted RBP10.71□□□□□ -0.69
SNX6-203ENST00000555416 MC5RP33032 325 aa10.71□□□□□ -0.69
SNX6-203ENST00000555416 PSG5Q15238 335 aa10.71□□□□□ -0.69
SNX6-203ENST00000555416 OXLD1Q5BKU9 147 aa10.71□□□□□ -0.69
SNX6-203ENST00000555416 SAMD5Q5TGI4 173 aa10.71□□□□□ -0.69
SNX6-203ENST00000555416 LIN54Q6MZP7 749 aa10.71□□□□□ -0.69
SNX6-203ENST00000555416 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.71□□□□□ -0.69
SNX6-203ENST00000555416 SLC25A46Q96AG3 418 aa10.71□□□□□ -0.69
SNX6-203ENST00000555416 OR51J1Q9H342 316 aa10.71□□□□□ -0.69
SNX6-203ENST00000555416 MEIS3P1A6NDR6 274 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 LINC00473A8K010 186 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 IGLV2-14P01704 120 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 IGLV2-23P01705 113 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 PPIFP30405 207 aaKnown RBP10.7□□□□□ -0.7
SNX6-203ENST00000555416 CX3CL1P78423 397 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 PITPNAQ00169 270 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 CTF1Q16619 201 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 BEAN1Q3B7T3 259 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 C19orf54Q5BKX5 351 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 C8orf86Q6ZUL3 223 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 SAMD12Q8N8I0 201 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 DUX3Q96PT4 197 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 CLCC1Q96S66 551 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 KLK15Q9H2R5 256 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 PARP11Q9NR21 331 aa10.7□□□□□ -0.7
SNX6-203ENST00000555416 ANXA10Q9UJ72 324 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms