RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 ST6GALNAC5Q9BVH7 336 aa6.15□□□□□ -1.42
ABCD4-220ENST00000553998 GHITMQ9H3K2 345 aa6.15□□□□□ -1.42
ABCD4-220ENST00000553998 ZNF230Q9UIE0 474 aaPredicted RBP6.15□□□□□ -1.42
ABCD4-220ENST00000553998 ANXA10Q9UJ72 324 aa6.15□□□□□ -1.42
ABCD4-220ENST00000553998 PITPNC1Q9UKF7 332 aa6.15□□□□□ -1.42
ABCD4-220ENST00000553998 TSSC4Q9Y5U2 329 aaPredicted RBP6.15□□□□□ -1.42
ABCD4-220ENST00000553998 PLECQ15149 4684 aaKnown RBP6.14□□□□□ -1.43
ABCD4-220ENST00000553998 TRBV6-7A0A0A0MS04 114 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 IGKV1-6A0A0C4DH72 117 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 FABP12A6NFH5 140 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 LEUTXA8MZ59 168 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 BUB1B-PAK6H3BSN5 160 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 HSPA12AO43301 675 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 PF4P02776 101 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 GSTT2P0CG29 244 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 GSTT2BP0CG30 244 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 PF4V1P10720 104 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 NAT1P18440 290 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 IL3RAP26951 378 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 HOXD3P31249 432 aaPredicted RBP6.14□□□□□ -1.43
ABCD4-220ENST00000553998 RCVRNP35243 200 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 PPP1CCP36873 323 aaKnown RBP6.14□□□□□ -1.43
ABCD4-220ENST00000553998 ETV6P41212 452 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 VDAC2P45880 294 aaPredicted RBP6.14□□□□□ -1.43
ABCD4-220ENST00000553998 RAB13P51153 203 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 ARHGDIBP52566 201 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 ZNF137PP52743 207 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 ACTBP60709 375 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 SSBP1Q04837 148 aaKnown RBP6.14□□□□□ -1.43
ABCD4-220ENST00000553998 MADCAM1Q13477 382 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 CASC10Q5T4H9 136 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 CCDC144NLQ6NUI1 221 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 CCDC190Q86UF4 302 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 OR2AK2Q8NG84 335 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 OR10V1Q8NGI7 309 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 OR6Q1Q8NGQ2 317 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 OR10X1Q8NGY0 326 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 OR10J5Q8NHC4 309 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 UBALD1Q8TB05 177 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 ABHD1Q96SE0 405 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 ABHD14AQ9BUJ0 271 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 IFT46Q9NQC8 304 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 ZMAT5Q9UDW3 170 aaKnown RBP6.14□□□□□ -1.43
ABCD4-220ENST00000553998 SLC23A1Q9UHI7 598 aa6.14□□□□□ -1.43
ABCD4-220ENST00000553998 ZNF107Q9UII5 783 aaPredicted RBP6.14□□□□□ -1.43
ABCD4-220ENST00000553998 LSM4Q9Y4Z0 139 aaKnown RBP6.14□□□□□ -1.43
ABCD4-220ENST00000553998 IGKV1D-8A0A087WSZ0 117 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 IGHV3-43A0A0B4J1X8 118 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 A0A1W2PRX2 142 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 FAM172BPA6NC97 362 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 LY6LH3BQJ8 138 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 GABARAPH6UMI1 98 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 BET1O15155 118 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 TXNL1O43396 289 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 GSTZ1O43708 216 aaPredicted RBP6.13□□□□□ -1.43
ABCD4-220ENST00000553998 PEX14O75381 377 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 RBBP9O75884 186 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 IGHV3-43DP0DP04 118 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 PTHLHP12272 177 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 TBPP20226 339 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 CEACAM6P40199 344 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 GNG10P50151 68 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 TAS2R46P59540 309 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 ARPC4P59998 168 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 IL18Q14116 193 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 GNMTQ14749 295 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 CNPY1Q3B7I2 92 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 ACTBL2Q562R1 376 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 IGSF11Q5DX21 431 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 CT45A1Q5HYN5 189 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 SPANXN2Q5MJ10 180 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 LDLRAD2Q5SZI1 272 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 UTF1Q5T230 341 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 TPTE2P1Q5T6R2 138 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 FAM71F2Q6NXP2 309 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 LHFPL4Q7Z7J7 247 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 H1FOOQ8IZA3 346 aaPredicted RBP6.13□□□□□ -1.43
ABCD4-220ENST00000553998 GVQW1Q8N7I0 195 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 OR5AP2Q8NGF4 316 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 OR52I2Q8NH67 350 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 CT45A3Q8NHU0 189 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 SMIM4Q8WVI0 70 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 FCAMRQ8WWV6 532 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 MAFIPQ8WZ33 124 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 DPF1Q92782 380 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 SNAPC3Q92966 411 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 LEAP2Q969E1 77 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 RPEQ96AT9 228 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 GINS4Q9BRT9 223 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 MCRIP2Q9BUT9 160 aaKnown RBP6.13□□□□□ -1.43
ABCD4-220ENST00000553998 KRTAP17-1Q9BYP8 105 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 RDH8Q9NYR8 311 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 PTTG2Q9NZH5 202 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 PIPOXQ9P0Z9 390 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 OR1A1Q9P1Q5 309 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 MTFP1Q9UDX5 166 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 HERC2O95714 4834 aa6.13□□□□□ -1.43
ABCD4-220ENST00000553998 LCE6AA0A183 80 aa6.12□□□□□ -1.43
ABCD4-220ENST00000553998 TCRBV4S1A1TA0A5B7 111 aa6.12□□□□□ -1.43
ABCD4-220ENST00000553998 RAB29O14966 203 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms