RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 HDHD3Q9BSH5 251 aaPredicted RBP9.22□□□□□ -0.93
SRP54-203ENST00000553544 PECRQ9BY49 303 aa9.22□□□□□ -0.93
SRP54-203ENST00000553544 IFI27L2Q9H2X8 130 aa9.22□□□□□ -0.93
SRP54-203ENST00000553544 ABRACLQ9P1F3 81 aa9.22□□□□□ -0.93
SRP54-203ENST00000553544 SACSQ9NZJ4 4579 aa9.22□□□□□ -0.93
SRP54-203ENST00000553544 SAA2-SAA4A0A096LPE2 208 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 TMEM272A0A1B0GTI8 110 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 AP4M1O00189 453 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 AIREO43918 545 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 SAA2P0DJI9 122 aaPredicted RBP9.21□□□□□ -0.94
SRP54-203ENST00000553544 OR3A3P47888 321 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 OR10A3P58181 314 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 HES5Q5TA89 166 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 ZFAND6Q6FIF0 208 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 FAM71F2Q6NXP2 309 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 SFXN4Q6P4A7 337 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 OR2AK2Q8NG84 335 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 IL1F10Q8WWZ1 152 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 CITED4Q96RK1 184 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 AGMATQ9BSE5 352 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 MRPS26Q9BYN8 205 aaKnown RBP9.21□□□□□ -0.94
SRP54-203ENST00000553544 CHMP1AQ9HD42 196 aaPredicted RBP9.21□□□□□ -0.94
SRP54-203ENST00000553544 Q9N2K0 584 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 KCNK7Q9Y2U2 307 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 SORL1Q92673 2214 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 LYSTQ99698 3801 aa9.21□□□□□ -0.94
SRP54-203ENST00000553544 TRIM64CA6NLI5 447 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 HLA-DRB3P79483 266 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 CFHR3Q02985 330 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 FOXE3Q13461 319 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 OVCH2Q7RTZ1 564 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 NR2C2APQ86WQ0 139 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 RITA1Q96K30 269 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 RASL11BQ9BPW5 248 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 HSPB9Q9BQS6 159 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 MRPL20Q9BYC9 149 aaKnown RBP9.2□□□□□ -0.94
SRP54-203ENST00000553544 PARP12Q9H0J9 701 aaKnown RBP9.2□□□□□ -0.94
SRP54-203ENST00000553544 OR51E2Q9H255 320 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 GHITMQ9H3K2 345 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 C12orf4Q9NQ89 552 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 PIPOXQ9P0Z9 390 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 SLC23A1Q9UHI7 598 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 ZNF580Q9UK33 172 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 ETV7Q9Y603 341 aa9.2□□□□□ -0.94
SRP54-203ENST00000553544 DNAH1Q9P2D7 4330 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 IGKV1-6A0A0C4DH72 117 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 RAB27BO00194 218 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 RAB29O14966 203 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 ST8SIA5O15466 376 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 PROP1O75360 226 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 IGF1P05019 195 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 ELANEP08246 267 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 SCTP09683 121 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 ZBTB25P24278 435 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 SOX6P35712 828 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 ACTBP60709 375 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 MOGAT2Q3SYC2 334 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 ZNF429Q86V71 674 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 RNF152Q8N8N0 203 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 NPBQ8NG41 125 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 SETD6Q8TBK2 473 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 RAB3CQ96E17 227 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 CMSS1Q9BQ75 279 aaKnown RBP9.19□□□□□ -0.94
SRP54-203ENST00000553544 TOLLIPQ9H0E2 274 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 C11orf54Q9H0W9 315 aaPredicted RBP9.19□□□□□ -0.94
SRP54-203ENST00000553544 OR1A1Q9P1Q5 309 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 DAPK2Q9UIK4 370 aa9.19□□□□□ -0.94
SRP54-203ENST00000553544 HUWE1Q7Z6Z7 4374 aaKnown RBP9.19□□□□□ -0.94
SRP54-203ENST00000553544 A0A0A6YYH2 397 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 A6NJ64 397 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 NDUFA3O95167 84 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 CD3GP09693 182 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 FRMD6-AS1P0C7T7 363 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 CT45A6P0DMU7 189 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 CT45A5P0DMU8 189 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 CT45A7P0DMV0 189 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 CNTFRP26992 372 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 SDC2P34741 201 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 CEACAM6P40199 344 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 MMDQ15546 238 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 OR11H1Q8NG94 326 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 C4orf3Q8WVX3 66 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 EDARADDQ8WWZ3 215 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 ABHD14BQ96IU4 210 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 KRTAP17-1Q9BYP8 105 aa9.18□□□□□ -0.94
SRP54-203ENST00000553544 A0A0B4J203 849 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 TRDCB7Z8K6 153 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 MFNGO00587 321 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 NBR2O15453 112 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 NOL3O60936 208 aaKnown RBP9.17□□□□□ -0.94
SRP54-203ENST00000553544 IGHG4P01861 327 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 HLA-DRB1P01911 266 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 SLC2A2P11168 524 aaPredicted RBP9.17□□□□□ -0.94
SRP54-203ENST00000553544 PPIFP30405 207 aaKnown RBP9.17□□□□□ -0.94
SRP54-203ENST00000553544 PITPNAQ00169 270 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 MXD1Q05195 221 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 FHL3Q13643 280 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 C5orf64Q2M2E5 130 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 RPL39P5Q59GN2 51 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 GPR141Q7Z602 305 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms