RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ETV7Q9Y603 341 aa15.14■□□□□ 0.01
PTCH1-227ENST00000553256 IGHV7-81A0A0B4J1V7 117 aa15.13■□□□□ 0.01
PTCH1-227ENST00000553256 TCRBV4S1A1TA0A5B7 111 aa15.13■□□□□ 0.01
PTCH1-227ENST00000553256 OR5H14A6NHG9 310 aa15.13■□□□□ 0.01
PTCH1-227ENST00000553256 TMEM127O75204 238 aa15.13■□□□□ 0.01
PTCH1-227ENST00000553256 RPS19P39019 145 aaKnown RBP15.13■□□□□ 0.01
PTCH1-227ENST00000553256 DEFA6Q01524 100 aa15.13■□□□□ 0.01
PTCH1-227ENST00000553256 MMDQ15546 238 aa15.13■□□□□ 0.01
PTCH1-227ENST00000553256 C5orf64Q2M2E5 130 aa15.13■□□□□ 0.01
PTCH1-227ENST00000553256 BEAN1Q3B7T3 259 aa15.13■□□□□ 0.01
PTCH1-227ENST00000553256 C19orf54Q5BKX5 351 aa15.13■□□□□ 0.01
PTCH1-227ENST00000553256 H1FOOQ8IZA3 346 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-227ENST00000553256 PHF21AQ96BD5 680 aa15.13■□□□□ 0.01
PTCH1-227ENST00000553256 RASL11BQ9BPW5 248 aa15.13■□□□□ 0.01
PTCH1-227ENST00000553256 DCSTAMPQ9H295 470 aa15.13■□□□□ 0.01
PTCH1-227ENST00000553256 TMEM235A6NFC5 223 aa15.12■□□□□ 0.01
PTCH1-227ENST00000553256 G3V4G9 280 aa15.12■□□□□ 0.01
PTCH1-227ENST00000553256 NBR2O15453 112 aa15.12■□□□□ 0.01
PTCH1-227ENST00000553256 HSPA12AO43301 675 aa15.12■□□□□ 0.01
PTCH1-227ENST00000553256 PPIFP30405 207 aaKnown RBP15.12■□□□□ 0.01
PTCH1-227ENST00000553256 SOX6P35712 828 aa15.12■□□□□ 0.01
PTCH1-227ENST00000553256 NDPQ00604 133 aa15.12■□□□□ 0.01
PTCH1-227ENST00000553256 C18orf65Q6ZTR6 163 aa15.12■□□□□ 0.01
PTCH1-227ENST00000553256 FOXRED2Q8IWF2 684 aa15.12■□□□□ 0.01
PTCH1-227ENST00000553256 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-227ENST00000553256 OR13F1Q8NGS4 319 aa15.12■□□□□ 0.01
PTCH1-227ENST00000553256 MYOZ3Q8TDC0 251 aa15.12■□□□□ 0.01
PTCH1-227ENST00000553256 NUDCD2Q8WVJ2 157 aa15.12■□□□□ 0.01
PTCH1-227ENST00000553256 SPATA2Q9UM82 520 aa15.12■□□□□ 0.01
PTCH1-227ENST00000553256 A0A1W2PRX2 142 aa15.11■□□□□ 0.01
PTCH1-227ENST00000553256 AIREO43918 545 aa15.11■□□□□ 0.01
PTCH1-227ENST00000553256 SCGNO76038 276 aa15.11■□□□□ 0.01
PTCH1-227ENST00000553256 IGHG4P01861 327 aa15.11■□□□□ 0.01
PTCH1-227ENST00000553256 IGKV1-16P04430 117 aa15.11■□□□□ 0.01
PTCH1-227ENST00000553256 MC5RP33032 325 aa15.11■□□□□ 0.01
PTCH1-227ENST00000553256 RPL23AP62750 156 aaKnown RBP15.11■□□□□ 0.01
PTCH1-227ENST00000553256 KIAA0141Q14154 515 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-227ENST00000553256 PNLIPRP3Q17RR3 467 aa15.11■□□□□ 0.01
PTCH1-227ENST00000553256 TIMM50Q3ZCQ8 353 aa15.11■□□□□ 0.01
PTCH1-227ENST00000553256 IDNKQ5T6J7 187 aa15.11■□□□□ 0.01
PTCH1-227ENST00000553256 COMMD1Q8N668 190 aa15.11■□□□□ 0.01
PTCH1-227ENST00000553256 DRAXINQ8NBI3 349 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-227ENST00000553256 RNF5Q99942 180 aa15.11■□□□□ 0.01
PTCH1-227ENST00000553256 SDHAF2Q9NX18 166 aa15.11■□□□□ 0.01
PTCH1-227ENST00000553256 A0A0A6YYH2 397 aa15.1■□□□□ 0.01
PTCH1-227ENST00000553256 A6NJ64 397 aa15.1■□□□□ 0.01
PTCH1-227ENST00000553256 BET1O15155 118 aa15.1■□□□□ 0.01
PTCH1-227ENST00000553256 EGR2P11161 476 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-227ENST00000553256 CRIP2P52943 208 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-227ENST00000553256 ARFRP1Q13795 201 aa15.1■□□□□ 0.01
PTCH1-227ENST00000553256 C1QL4Q86Z23 238 aa15.1■□□□□ 0.01
PTCH1-227ENST00000553256 OR10J5Q8NHC4 309 aa15.1■□□□□ 0.01
PTCH1-227ENST00000553256 ZFP57Q9NU63 452 aa15.1■□□□□ 0.01
PTCH1-227ENST00000553256 WASHC3Q9Y3C0 194 aa15.1■□□□□ 0.01
PTCH1-227ENST00000553256 FBXO7Q9Y3I1 522 aa15.1■□□□□ 0.01
PTCH1-227ENST00000553256 FCN1O00602 326 aa15.09■□□□□ 0.01
PTCH1-227ENST00000553256 RRHO14718 337 aa15.09■□□□□ 0.01
PTCH1-227ENST00000553256 RBBP9O75884 186 aa15.09■□□□□ 0.01
PTCH1-227ENST00000553256 IGLV2-14P01704 120 aa15.09■□□□□ 0.01
PTCH1-227ENST00000553256 OR8U9P0C7N5 309 aa15.09■□□□□ 0.01
PTCH1-227ENST00000553256 PSMB8P28062 276 aa15.09■□□□□ 0.01
PTCH1-227ENST00000553256 SSBP2P81877 361 aaPredicted RBP15.09■□□□□ 0.01
PTCH1-227ENST00000553256 MRPS15P82914 257 aaKnown RBP15.09■□□□□ 0.01
PTCH1-227ENST00000553256 OR8U1Q8NH10 309 aa15.09■□□□□ 0.01
PTCH1-227ENST00000553256 DDB2Q92466 427 aa15.09■□□□□ 0.01
PTCH1-227ENST00000553256 FUNDC2Q9BWH2 189 aa15.09■□□□□ 0.01
PTCH1-227ENST00000553256 OR51J1Q9H342 316 aa15.09■□□□□ 0.01
PTCH1-227ENST00000553256 IGLV2-23P01705 113 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 TFAP2AP05549 437 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 CRYGBP07316 175 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 PITPNAQ00169 270 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 FOXE3Q13461 319 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 TEX38Q6PEX7 206 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 LINC00482Q8N8I6 264 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 MINDY2Q8NBR6 621 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 P2RX4Q99571 388 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 OR2D2Q9H210 308 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 AUNIPQ9H7T9 357 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 ZNF221Q9UK13 617 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 TGP01266 2768 aa15.08■□□□□ 0
PTCH1-227ENST00000553256 G3V318 75 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 ATP6V0E1O15342 81 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 TUSC2O75896 110 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 IGLV1-40P01703 118 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 HLA-DQB1P01920 261 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 RPLP1P05386 114 aaKnown RBP15.07■□□□□ 0
PTCH1-227ENST00000553256 ELANEP08246 267 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 TALDO1P37837 337 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 NCS1P62166 190 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 LSM3P62310 102 aaKnown RBP15.07■□□□□ 0
PTCH1-227ENST00000553256 SLC35B1P78383 322 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 EIF4EBP1Q13541 118 aaPredicted RBP15.07■□□□□ 0
PTCH1-227ENST00000553256 PSG5Q15238 335 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 MRGPRG-AS1Q2M3A8 158 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 PDLIM3Q53GG5 364 aaPredicted RBP15.07■□□□□ 0
PTCH1-227ENST00000553256 OXLD1Q5BKU9 147 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 LIN54Q6MZP7 749 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 CNIH2Q6PI25 160 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 LCNL1Q6ZST4 164 aa15.07■□□□□ 0
PTCH1-227ENST00000553256 PDPNQ86YL7 162 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms