RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 SPDEFO95238 335 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 IGKV1D-33P01593 117 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 IGKV1-33P01594 117 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 HLA-DQB1P01920 261 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 OR8U9P0C7N5 309 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 NAT1P18440 290 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 ELK1P19419 428 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 TGFBR1P36897 503 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 ECI1P42126 302 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 KIR2DS2P43631 304 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 AP3S2P59780 193 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 HERV-K104P61576 105 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 SLC35B1P78383 322 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 GNMTQ14749 295 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 IGSF11Q5DX21 431 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 ZNF66Q6ZN08 573 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 Q6ZSV7 163 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 DYNAPQ8N1N2 210 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 ZNF645Q8N7E2 425 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 TCTEX1D1Q8N7M0 179 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 POC5Q8NA72 575 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 OR5AN1Q8NGI8 311 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 OR8U1Q8NH10 309 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 LINC01006Q8NI28 216 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 UBALD1Q8TB05 177 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 GPX8Q8TED1 209 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 CHPT1Q8WUD6 406 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 CFHR4Q92496 578 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 EAF1Q96JC9 268 aaPredicted RBP8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 MDFIQ99750 246 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 C6orf62Q9GZU0 229 aaPredicted RBP8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 NAA50Q9GZZ1 169 aaKnown RBP8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 IFI27L2Q9H2X8 130 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 EXTL2Q9UBQ6 330 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 ZNF230Q9UIE0 474 aaPredicted RBP8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 SOX21Q9Y651 276 aaPredicted RBP8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 CEPT1Q9Y6K0 416 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 ANK3Q12955 4377 aaKnown RBP8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 GABARAPH6UMI1 98 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 CTDSPLO15194 276 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 EIF4EP06730 217 aaKnown RBP8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 VDAC2P45880 294 aaPredicted RBP8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 TSPAN5P62079 268 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 CATR1Q13166 79 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 MEF2DQ14814 521 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 SPCS2Q15005 226 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 SPANXN2Q5MJ10 180 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 LDLRAD2Q5SZI1 272 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 DHRS11Q6UWP2 260 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 ARRDC1Q8N5I2 433 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 VSTM2AQ8TAG5 236 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 FLYWCH2Q96CP2 140 aaKnown RBP8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 NABP2Q9BQ15 211 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 OR2D2Q9H210 308 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 OR1A1Q9P1Q5 309 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 ZNF580Q9UK33 172 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 RNF150Q9ULK6 438 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 ANAPC10Q9UM13 185 aa8.22□□□□□ -1.09
TRAFD1-208ENST00000552890 IGKV1-6A0A0C4DH72 117 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 ZNF736B4DX44 427 aaPredicted RBP8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 M0QZ24 198 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 M0R1X1 148 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 AP4M1O00189 453 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 SLC31A2O15432 143 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 SSX5O60225 188 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 TUSC2O75896 110 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 OPN1MWP04001 364 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 CSF1P09603 554 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 OPN1MW2P0DN77 364 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 OPN1MW3P0DN78 364 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 CD40LGP29965 261 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 SLC6A1P30531 599 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 FCGR2CP31995 323 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 FAUP35544 74 aaKnown RBP8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 REG1BP48304 166 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 TAS2R19P59542 299 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 TMEM267Q0VDI3 215 aaPredicted RBP8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 DYRK1AQ13627 763 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 HERPUD1Q15011 391 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 PLGLAQ15195 96 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 MMDQ15546 238 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 LINC00299Q6ZSB3 139 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 OVCH2Q7RTZ1 564 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 TMEM219Q86XT9 240 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 SNX29P2Q8IUI4 249 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 ODF3L1Q8IXM7 274 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 OSR1Q8TAX0 266 aaPredicted RBP8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 ABHD14BQ96IU4 210 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 SCGB3A2Q96PL1 93 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 BATF3Q9NR55 127 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 EHFQ9NZC4 300 aa8.21□□□□□ -1.1
TRAFD1-208ENST00000552890 FBN1P35555 2871 aaKnown RBP8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 FABP12A6NFH5 140 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 NBR2O15453 112 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 B3GALNT1O75752 331 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 PPYP01298 95 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 CT45A6P0DMU7 189 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 CT45A5P0DMU8 189 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 CT45A7P0DMV0 189 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 PROK1P58294 105 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms