RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 AP4M1O00189 453 aa7.71□□□□□ -1.17
UBE2N-205ENST00000550657 CLN5O75503 358 aa7.71□□□□□ -1.17
UBE2N-205ENST00000550657 BCL2P10415 239 aa7.71□□□□□ -1.17
UBE2N-205ENST00000550657 GCH1P30793 250 aa7.71□□□□□ -1.17
UBE2N-205ENST00000550657 KIR2DL2P43627 348 aaPredicted RBP7.71□□□□□ -1.17
UBE2N-205ENST00000550657 CLEC12BQ2HXU8 276 aa7.71□□□□□ -1.17
UBE2N-205ENST00000550657 INO80CQ6PI98 192 aaPredicted RBP7.71□□□□□ -1.17
UBE2N-205ENST00000550657 C11orf53Q8IXP5 236 aa7.71□□□□□ -1.17
UBE2N-205ENST00000550657 OR2Z1Q8NG97 314 aa7.71□□□□□ -1.17
UBE2N-205ENST00000550657 TAF15Q92804 592 aaKnown RBP eCLIP7.71□□□□□ -1.17
UBE2N-205ENST00000550657 SMDT1Q9H4I9 107 aa7.71□□□□□ -1.17
UBE2N-205ENST00000550657 TREM2Q9NZC2 230 aa7.71□□□□□ -1.17
UBE2N-205ENST00000550657 CLCF1Q9UBD9 225 aa7.71□□□□□ -1.17
UBE2N-205ENST00000550657 TTC28Q96AY4 2481 aa7.71□□□□□ -1.18
UBE2N-205ENST00000550657 IGHV3OR15-7A0A075B7D8 119 aa7.71□□□□□ -1.18
UBE2N-205ENST00000550657 IGKV1D-33P01593 117 aa7.71□□□□□ -1.18
UBE2N-205ENST00000550657 IGKV1-33P01594 117 aa7.71□□□□□ -1.18
UBE2N-205ENST00000550657 ELOBQ15370 118 aa7.71□□□□□ -1.18
UBE2N-205ENST00000550657 DEFB109BQ30KR1 87 aa7.71□□□□□ -1.18
UBE2N-205ENST00000550657 ACP7Q6ZNF0 438 aa7.71□□□□□ -1.18
UBE2N-205ENST00000550657 ZNF610Q8N9Z0 462 aa7.71□□□□□ -1.18
UBE2N-205ENST00000550657 WDR31Q8NA23 367 aa7.71□□□□□ -1.18
UBE2N-205ENST00000550657 NECAP1Q8NC96 275 aa7.71□□□□□ -1.18
UBE2N-205ENST00000550657 OR5T1Q8NG75 326 aa7.71□□□□□ -1.18
UBE2N-205ENST00000550657 CACNA1HO95180 2353 aa7.71□□□□□ -1.18
UBE2N-205ENST00000550657 TNRC6AQ8NDV7 1962 aaKnown RBP7.71□□□□□ -1.18
UBE2N-205ENST00000550657 OOEPA6NGQ2 149 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 FGF7P21781 194 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 WDR82Q6UXN9 313 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 H2BFWTQ7Z2G1 175 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 GATAD1Q8WUU5 269 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 LRRC29Q8WV35 223 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 RPUSD4Q96CM3 377 aaKnown RBP7.7□□□□□ -1.18
UBE2N-205ENST00000550657 CXXC4Q9H2H0 198 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 PCNX2A6NKB5 2137 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 MAP1BP46821 2468 aaKnown RBP7.7□□□□□ -1.18
UBE2N-205ENST00000550657 KMT2EQ8IZD2 1858 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 LINC00473A8K010 186 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 ZNF737O75373 536 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 TRGC2P03986 189 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 TFF3Q07654 80 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 CATR1Q13166 79 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 MSMO1Q15800 293 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 ADIRFQ15847 76 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 TMEM41BQ5BJD5 291 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 FAM90A2PQ658T7 463 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 DTD1Q8TEA8 209 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 LOXL4Q96JB6 756 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 SSX3Q99909 188 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 METTL1Q9UBP6 276 aaKnown RBP7.7□□□□□ -1.18
UBE2N-205ENST00000550657 PIGBOS1A0A0B4J2F0 54 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 SMCO3A2RU48 225 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 TMEM210A6NLX4 147 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 LRRC30A6NM36 301 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 TUBG1P23258 451 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 ZNF83P51522 516 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 ACSM6Q6P461 480 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 DPPA3Q6W0C5 159 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 LRP11Q86VZ4 500 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 VKORC1L1Q8N0U8 176 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 RPP25LQ8N5L8 163 aaKnown RBP7.7□□□□□ -1.18
UBE2N-205ENST00000550657 GNG12Q9UBI6 72 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 DMXL1Q9Y485 3027 aa7.7□□□□□ -1.18
UBE2N-205ENST00000550657 CNOT1A5YKK6 2376 aaKnown RBP7.7□□□□□ -1.18
UBE2N-205ENST00000550657 RP1L1Q8IWN7 2480 aaPredicted RBP7.69□□□□□ -1.18
UBE2N-205ENST00000550657 IGHV2-5P01817 119 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 S100A8P05109 93 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 EDDM3BP56851 147 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 BRWD1-AS2P59051 145 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 ZNF718Q3SXZ3 478 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 OR10P1Q8NGE3 313 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 LEAP2Q969E1 77 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 YPEL4Q96NS1 127 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.69□□□□□ -1.18
UBE2N-205ENST00000550657 CISD1Q9NZ45 108 aaKnown RBP7.69□□□□□ -1.18
UBE2N-205ENST00000550657 LINC00587B1AMM8 73 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 FCGR3BO75015 233 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 FABP1P07148 127 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 EIF2S3P41091 472 aaKnown RBP7.69□□□□□ -1.18
UBE2N-205ENST00000550657 FFAR4Q5NUL3 377 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 FAM201AQ5SY85 155 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 SP5Q6BEB4 398 aaPredicted RBP7.69□□□□□ -1.18
UBE2N-205ENST00000550657 SLC35E4Q6ICL7 350 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 SLC35E3Q7Z769 313 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 CD177Q8N6Q3 437 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 CA5BP1Q8WTZ4 195 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 DOK5Q9P104 306 aa7.69□□□□□ -1.18
UBE2N-205ENST00000550657 J3QW42 95 aa7.68□□□□□ -1.18
UBE2N-205ENST00000550657 IGKV3-15P01624 115 aa7.68□□□□□ -1.18
UBE2N-205ENST00000550657 SMIM6P0DI80 62 aa7.68□□□□□ -1.18
UBE2N-205ENST00000550657 EGR1P18146 543 aa7.68□□□□□ -1.18
UBE2N-205ENST00000550657 SMIM21Q3B7S5 101 aa7.68□□□□□ -1.18
UBE2N-205ENST00000550657 GFI1BQ5VTD9 330 aa7.68□□□□□ -1.18
UBE2N-205ENST00000550657 NCR3LG1Q68D85 454 aa7.68□□□□□ -1.18
UBE2N-205ENST00000550657 SPNS3Q6ZMD2 512 aa7.68□□□□□ -1.18
UBE2N-205ENST00000550657 ZNRF1Q8ND25 227 aa7.68□□□□□ -1.18
UBE2N-205ENST00000550657 OR10G4Q8NGN3 311 aa7.68□□□□□ -1.18
UBE2N-205ENST00000550657 OR10G9Q8NGN4 311 aa7.68□□□□□ -1.18
UBE2N-205ENST00000550657 OR10G7Q8NGN6 311 aa7.68□□□□□ -1.18
UBE2N-205ENST00000550657 SMIM7Q9BQ49 75 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms