RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 IGHG4P01861 327 aa13.28□□□□□ -0.28
HOXD8-204ENST00000544999 MYCNOSP40205 109 aa13.28□□□□□ -0.28
HOXD8-204ENST00000544999 SRSF7Q16629 238 aaKnown RBP eCLIP13.28□□□□□ -0.28
HOXD8-204ENST00000544999 GLDNQ6ZMI3 551 aaPredicted RBP13.28□□□□□ -0.28
HOXD8-204ENST00000544999 C8orf86Q6ZUL3 223 aa13.28□□□□□ -0.28
HOXD8-204ENST00000544999 ZNF695Q8IW36 515 aa13.28□□□□□ -0.28
HOXD8-204ENST00000544999 LINC00482Q8N8I6 264 aa13.28□□□□□ -0.28
HOXD8-204ENST00000544999 OR5AN1Q8NGI8 311 aa13.28□□□□□ -0.28
HOXD8-204ENST00000544999 ATG5Q9H1Y0 275 aa13.28□□□□□ -0.28
HOXD8-204ENST00000544999 NECAP2Q9NVZ3 263 aa13.28□□□□□ -0.28
HOXD8-204ENST00000544999 ZNF221Q9UK13 617 aa13.28□□□□□ -0.28
HOXD8-204ENST00000544999 WASHC3Q9Y3C0 194 aa13.28□□□□□ -0.28
HOXD8-204ENST00000544999 IGHV7-81A0A0B4J1V7 117 aa13.27□□□□□ -0.29
HOXD8-204ENST00000544999 RPLP1P05386 114 aaKnown RBP13.27□□□□□ -0.29
HOXD8-204ENST00000544999 GSTT2P0CG29 244 aa13.27□□□□□ -0.29
HOXD8-204ENST00000544999 GSTT2BP0CG30 244 aa13.27□□□□□ -0.29
HOXD8-204ENST00000544999 ARFRP1Q13795 201 aa13.27□□□□□ -0.29
HOXD8-204ENST00000544999 LIN54Q6MZP7 749 aa13.27□□□□□ -0.29
HOXD8-204ENST00000544999 SFXN4Q6P4A7 337 aa13.27□□□□□ -0.29
HOXD8-204ENST00000544999 MRPL41Q8IXM3 137 aaKnown RBP13.27□□□□□ -0.29
HOXD8-204ENST00000544999 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.27□□□□□ -0.29
HOXD8-204ENST00000544999 KCTD7Q96MP8 289 aa13.27□□□□□ -0.29
HOXD8-204ENST00000544999 RNF5Q99942 180 aa13.27□□□□□ -0.29
HOXD8-204ENST00000544999 CENPOQ9BU64 300 aa13.27□□□□□ -0.29
HOXD8-204ENST00000544999 OR51J1Q9H342 316 aa13.27□□□□□ -0.29
HOXD8-204ENST00000544999 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.27□□□□□ -0.29
HOXD8-204ENST00000544999 RNF150Q9ULK6 438 aa13.27□□□□□ -0.29
HOXD8-204ENST00000544999 TRBV6-7A0A0A0MS04 114 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 H7C2Y5 167 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 RRHO14718 337 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 ATP6V0E1O15342 81 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 PROP1O75360 226 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 PRB2P02812 416 aaPredicted RBP13.26□□□□□ -0.29
HOXD8-204ENST00000544999 GSTP1P09211 210 aaKnown RBP13.26□□□□□ -0.29
HOXD8-204ENST00000544999 TALDO1P37837 337 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 NEDD8Q15843 81 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 IGSF11Q5DX21 431 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 FOXB2Q5VYV0 432 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 Q6ZS49 121 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 OR10J5Q8NHC4 309 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 P2RX4Q99571 388 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 DAPK2Q9UIK4 370 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 NOTCH3Q9UM47 2321 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 GAB2Q9UQC2 676 aa13.26□□□□□ -0.29
HOXD8-204ENST00000544999 BET1O15155 118 aa13.25□□□□□ -0.29
HOXD8-204ENST00000544999 SCGNO76038 276 aa13.25□□□□□ -0.29
HOXD8-204ENST00000544999 TFAP2AP05549 437 aa13.25□□□□□ -0.29
HOXD8-204ENST00000544999 DTYMKP23919 212 aa13.25□□□□□ -0.29
HOXD8-204ENST00000544999 PSMB8P28062 276 aa13.25□□□□□ -0.29
HOXD8-204ENST00000544999 PPIFP30405 207 aaKnown RBP13.25□□□□□ -0.29
HOXD8-204ENST00000544999 SDC2P34741 201 aa13.25□□□□□ -0.29
HOXD8-204ENST00000544999 CDX1P47902 265 aaPredicted RBP13.25□□□□□ -0.29
HOXD8-204ENST00000544999 MAFIPQ8WZ33 124 aa13.25□□□□□ -0.29
HOXD8-204ENST00000544999 GPR61Q9BZJ8 451 aa13.25□□□□□ -0.29
HOXD8-204ENST00000544999 FBXL15Q9H469 300 aa13.25□□□□□ -0.29
HOXD8-204ENST00000544999 PARP11Q9NR21 331 aa13.25□□□□□ -0.29
HOXD8-204ENST00000544999 ZNF230Q9UIE0 474 aaPredicted RBP13.25□□□□□ -0.29
HOXD8-204ENST00000544999 LOC100506127A0A0U1RQW1 187 aa13.24□□□□□ -0.29
HOXD8-204ENST00000544999 APOA2P02652 100 aa13.24□□□□□ -0.29
HOXD8-204ENST00000544999 SNRPBP14678 240 aaKnown RBP13.24□□□□□ -0.29
HOXD8-204ENST00000544999 CD36P16671 472 aa13.24□□□□□ -0.29
HOXD8-204ENST00000544999 SCAND1P57086 179 aa13.24□□□□□ -0.29
HOXD8-204ENST00000544999 PLGLAQ15195 96 aa13.24□□□□□ -0.29
HOXD8-204ENST00000544999 CDNFQ49AH0 187 aa13.24□□□□□ -0.29
HOXD8-204ENST00000544999 ZNF660Q6AZW8 331 aaPredicted RBP13.24□□□□□ -0.29
HOXD8-204ENST00000544999 LCNL1Q6ZST4 164 aa13.24□□□□□ -0.29
HOXD8-204ENST00000544999 PDPNQ86YL7 162 aa13.24□□□□□ -0.29
HOXD8-204ENST00000544999 ZNF383Q8NA42 475 aa13.24□□□□□ -0.29
HOXD8-204ENST00000544999 DRAXINQ8NBI3 349 aaPredicted RBP13.24□□□□□ -0.29
HOXD8-204ENST00000544999 LGALS14Q8TCE9 139 aa13.24□□□□□ -0.29
HOXD8-204ENST00000544999 RNF167Q9H6Y7 350 aa13.24□□□□□ -0.29
HOXD8-204ENST00000544999 AURKAIP1Q9NWT8 199 aaPredicted RBP13.24□□□□□ -0.29
HOXD8-204ENST00000544999 TRAV41A0A0B4J266 112 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 G3V318 75 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 M0R1X1 148 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 CCL24O00175 119 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 SPDEFO95238 335 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 CLEC2LP0C7M8 214 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 OR8U9P0C7N5 309 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 CRIP2P52943 208 aaPredicted RBP13.23□□□□□ -0.29
HOXD8-204ENST00000544999 MXD1Q05195 221 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 HACD4Q5VWC8 232 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 OR8U1Q8NH10 309 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 MYOZ3Q8TDC0 251 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 RAX2Q96IS3 184 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 TSNAXQ99598 290 aaKnown RBP13.23□□□□□ -0.29
HOXD8-204ENST00000544999 GINS4Q9BRT9 223 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 MCRIP2Q9BUT9 160 aaKnown RBP13.23□□□□□ -0.29
HOXD8-204ENST00000544999 OR2D2Q9H210 308 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 ELF5Q9UKW6 265 aaPredicted RBP13.23□□□□□ -0.29
HOXD8-204ENST00000544999 WSB1Q9Y6I7 421 aa13.23□□□□□ -0.29
HOXD8-204ENST00000544999 IGLV1-40P01703 118 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 IGKV1-16P04430 117 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 CX3CL1P78423 397 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 PITPNAQ00169 270 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 NDPQ00604 133 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 PSG5Q15238 335 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 ZNF260Q3ZCT1 412 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 H1FOOQ8IZA3 346 aaPredicted RBP13.22□□□□□ -0.29
HOXD8-204ENST00000544999 MRAPQ8TCY5 172 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms