RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 ZNF439Q8NDP4 499 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 NPBQ8NG41 125 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 VSTM2AQ8TAG5 236 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 UBALD1Q8TB05 177 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 ABHD5Q8WTS1 349 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 AP3S1Q92572 193 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 TAF15Q92804 592 aaKnown RBP eCLIP4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 KCTD12Q96CX2 325 aaKnown RBP4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 RDH8Q9NYR8 311 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 NOTCH3Q9UM47 2321 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 TRBV6-7A0A0A0MS04 114 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 A0A0G2JLM5 398 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 A0A1W2PRX2 142 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 LDLRAD4O15165 306 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 SHOXO15266 292 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 CYB5BO43169 146 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 NOL3O60936 208 aaKnown RBP4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 FCGR3AP08637 254 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 OR8U8P0C7N1 319 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 KIR2DS2P43631 304 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 CDX1P47902 265 aaPredicted RBP4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 THBS3P49746 956 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 INSL3P51460 131 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 LUMP51884 338 aaPredicted RBP4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 RPL23AP62750 156 aaKnown RBP4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 C5orf64Q2M2E5 130 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF562Q6V9R5 426 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 FAM71E2Q8N5Q1 922 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 Q8N6K4 173 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 Q8N9W7 124 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 POC5Q8NA72 575 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 ZBTB34Q8NCN2 500 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 KLHL30-AS1Q8NEE0 82 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 WFDC9Q8NEX5 89 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 OR5AN1Q8NGI8 311 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 OR5M8Q8NGP6 311 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 ACOT12Q8WYK0 555 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 CMTM3Q96MX0 182 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 NABP2Q9BQ15 211 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 CABLES2Q9BTV7 478 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 ST6GALNAC5Q9BVH7 336 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 MRPL20Q9BYC9 149 aaKnown RBP4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 TOLLIPQ9H0E2 274 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 C11orf54Q9H0W9 315 aaPredicted RBP4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 OR2D2Q9H210 308 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 IFI27L2Q9H2X8 130 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 OR51J1Q9H342 316 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 SLA2Q9H6Q3 261 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 IFT46Q9NQC8 304 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 SLC35D1Q9NTN3 355 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 NECAP2Q9NVZ3 263 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 RHBDL2Q9NX52 303 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF581Q9P0T4 197 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 SPATA2Q9UM82 520 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 VSIG4Q9Y279 399 aa4.44□□□□□ -1.7
CLSTN3-215ENST00000544584 RYR2Q92736 4967 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 A0A0A6YYD4 124 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 TRAV41A0A0B4J266 112 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 H3BUA1 57 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 M0R1X1 148 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 RAB27BO00194 218 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 MFNGO00587 321 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 RRHO14718 337 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 SLC31A2O15432 143 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 RAMP3O60896 148 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 NDUFA3O95167 84 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 TSPAN15O95858 294 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 DHFRP00374 187 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 IGHG4P01861 327 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 AMY1AP04745 511 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 AMY2AP04746 511 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 SCTP09683 121 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 OR8U9P0C7N5 309 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 CT45A6P0DMU7 189 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 CT45A5P0DMU8 189 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 CT45A7P0DMV0 189 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 SLC2A2P11168 524 aaPredicted RBP4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 JUNBP17275 347 aaPredicted RBP4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 OR3A3P47888 321 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 RORCP51449 518 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 F2RL1P55085 397 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 TMEM50BP56557 158 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 OR10A3P58181 314 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 TAS2R46P59540 309 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 KRTAP10-3P60369 221 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 MXD1Q05195 221 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 CATR1Q13166 79 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 DIAPH2-AS1Q14236 149 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 GNMTQ14749 295 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 TMEM95Q3KNT9 176 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 MOGAT2Q3SYC2 334 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 AKIRIN2Q53H80 203 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 PLAC9Q5JTB6 97 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 UBE2NLQ5JXB2 153 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 TMEM69Q5SWH9 247 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 LPCAT3Q6P1A2 487 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 FAM131AQ6UXB0 335 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF329Q86UD4 541 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 SLC25A42Q86VD7 318 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF645Q8N7E2 425 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms