RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 OR5H14A6NHG9 310 aa17.24■□□□□ 0.35
OTUB1-212ENST00000543988 M0R1X1 148 aa17.24■□□□□ 0.35
OTUB1-212ENST00000543988 TSPAN15O95858 294 aa17.24■□□□□ 0.35
OTUB1-212ENST00000543988 CNTFRP26992 372 aa17.24■□□□□ 0.35
OTUB1-212ENST00000543988 RORCP51449 518 aa17.24■□□□□ 0.35
OTUB1-212ENST00000543988 LINC00205P59089 165 aa17.24■□□□□ 0.35
OTUB1-212ENST00000543988 TAS2R20P59543 309 aa17.24■□□□□ 0.35
OTUB1-212ENST00000543988 TMEM69Q5SWH9 247 aa17.24■□□□□ 0.35
OTUB1-212ENST00000543988 SLC35E3Q7Z769 313 aa17.24■□□□□ 0.35
OTUB1-212ENST00000543988 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.24■□□□□ 0.35
OTUB1-212ENST00000543988 OR5AN1Q8NGI8 311 aa17.24■□□□□ 0.35
OTUB1-212ENST00000543988 IGHG2P01859 326 aa17.23■□□□□ 0.35
OTUB1-212ENST00000543988 FCER2P06734 321 aa17.23■□□□□ 0.35
OTUB1-212ENST00000543988 CTXN2P0C2S0 81 aa17.23■□□□□ 0.35
OTUB1-212ENST00000543988 C2orf68Q2NKX9 166 aa17.23■□□□□ 0.35
OTUB1-212ENST00000543988 CNIH2Q6PI25 160 aa17.23■□□□□ 0.35
OTUB1-212ENST00000543988 C10orf99Q6UWK7 81 aa17.23■□□□□ 0.35
OTUB1-212ENST00000543988 CLVS1Q8IUQ0 354 aaPredicted RBP17.23■□□□□ 0.35
OTUB1-212ENST00000543988 ZNF383Q8NA42 475 aa17.23■□□□□ 0.35
OTUB1-212ENST00000543988 OR5AU1Q8NGC0 362 aa17.23■□□□□ 0.35
OTUB1-212ENST00000543988 ACOT12Q8WYK0 555 aa17.23■□□□□ 0.35
OTUB1-212ENST00000543988 NOL4LQ96MY1 436 aaPredicted RBP17.23■□□□□ 0.35
OTUB1-212ENST00000543988 CITED2Q99967 270 aaPredicted RBP17.23■□□□□ 0.35
OTUB1-212ENST00000543988 RASL11BQ9BPW5 248 aa17.23■□□□□ 0.35
OTUB1-212ENST00000543988 SDHAF2Q9NX18 166 aa17.23■□□□□ 0.35
OTUB1-212ENST00000543988 WASHC3Q9Y3C0 194 aa17.23■□□□□ 0.35
OTUB1-212ENST00000543988 LINC01548A6NM66 108 aa17.22■□□□□ 0.35
OTUB1-212ENST00000543988 APOA1P02647 267 aa17.22■□□□□ 0.35
OTUB1-212ENST00000543988 RPL5P46777 297 aaKnown RBP17.22■□□□□ 0.35
OTUB1-212ENST00000543988 SPCS2Q15005 226 aa17.22■□□□□ 0.35
OTUB1-212ENST00000543988 TCTEX1D4Q5JR98 221 aa17.22■□□□□ 0.35
OTUB1-212ENST00000543988 TREML4Q6UXN2 200 aa17.22■□□□□ 0.35
OTUB1-212ENST00000543988 CENPVQ7Z7K6 275 aaPredicted RBP17.22■□□□□ 0.35
OTUB1-212ENST00000543988 HOGA1Q86XE5 327 aa17.22■□□□□ 0.35
OTUB1-212ENST00000543988 BEST4Q8NFU0 473 aa17.22■□□□□ 0.35
OTUB1-212ENST00000543988 RBM7Q9Y580 266 aaKnown RBP17.22■□□□□ 0.35
OTUB1-212ENST00000543988 WNK1Q9H4A3 2382 aa17.22■□□□□ 0.35
OTUB1-212ENST00000543988 MEIS3P1A6NDR6 274 aa17.21■□□□□ 0.35
OTUB1-212ENST00000543988 H7C2Y5 167 aa17.21■□□□□ 0.35
OTUB1-212ENST00000543988 NBR2O15453 112 aa17.21■□□□□ 0.35
OTUB1-212ENST00000543988 HPGDSO60760 199 aa17.21■□□□□ 0.35
OTUB1-212ENST00000543988 NFYAP23511 347 aaPredicted RBP17.21■□□□□ 0.35
OTUB1-212ENST00000543988 MC5RP33032 325 aa17.21■□□□□ 0.35
OTUB1-212ENST00000543988 SNAPC3Q92966 411 aa17.21■□□□□ 0.35
OTUB1-212ENST00000543988 HSPB9Q9BQS6 159 aa17.21■□□□□ 0.35
OTUB1-212ENST00000543988 LINC00527Q9UJ94 153 aa17.21■□□□□ 0.35
OTUB1-212ENST00000543988 ADARB2-AS1A8MUL3 147 aa17.2■□□□□ 0.34
OTUB1-212ENST00000543988 ZNF182P17025 639 aaPredicted RBP17.2■□□□□ 0.34
OTUB1-212ENST00000543988 ELK1P19419 428 aa17.2■□□□□ 0.34
OTUB1-212ENST00000543988 SOX6P35712 828 aa17.2■□□□□ 0.34
OTUB1-212ENST00000543988 ARPC4P59998 168 aa17.2■□□□□ 0.34
OTUB1-212ENST00000543988 NPBQ8NG41 125 aa17.2■□□□□ 0.34
OTUB1-212ENST00000543988 RAB2BQ8WUD1 216 aa17.2■□□□□ 0.34
OTUB1-212ENST00000543988 AP3S1Q92572 193 aa17.2■□□□□ 0.34
OTUB1-212ENST00000543988 CMTM3Q96MX0 182 aa17.2■□□□□ 0.34
OTUB1-212ENST00000543988 GAB2Q9UQC2 676 aa17.2■□□□□ 0.34
OTUB1-212ENST00000543988 OR2W1Q9Y3N9 320 aa17.2■□□□□ 0.34
OTUB1-212ENST00000543988 PSMB11A5LHX3 300 aa17.19■□□□□ 0.34
OTUB1-212ENST00000543988 J3QRK9 145 aa17.19■□□□□ 0.34
OTUB1-212ENST00000543988 IGKV1-16P04430 117 aa17.19■□□□□ 0.34
OTUB1-212ENST00000543988 CSF1P09603 554 aa17.19■□□□□ 0.34
OTUB1-212ENST00000543988 CBX5P45973 191 aa17.19■□□□□ 0.34
OTUB1-212ENST00000543988 C5orf64Q2M2E5 130 aa17.19■□□□□ 0.34
OTUB1-212ENST00000543988 NSUN5P1Q3KNT7 163 aa17.19■□□□□ 0.34
OTUB1-212ENST00000543988 ZNF329Q86UD4 541 aa17.19■□□□□ 0.34
OTUB1-212ENST00000543988 FOXRED2Q8IWF2 684 aa17.19■□□□□ 0.34
OTUB1-212ENST00000543988 ZNF107Q9UII5 783 aaPredicted RBP17.19■□□□□ 0.34
OTUB1-212ENST00000543988 IGKV1D-13A0A0B4J2D9 117 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 AP4M1O00189 453 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 KCNAB3O43448 404 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 RBBP9O75884 186 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 TUSC2O75896 110 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 NDUFA3O95167 84 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 APOA2P02652 100 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 IGKV1-13P0DP09 117 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 LUMP51884 338 aaPredicted RBP17.18■□□□□ 0.34
OTUB1-212ENST00000543988 CD83Q01151 205 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 MZT2AQ6P582 158 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 NDUFA11Q86Y39 141 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 STPG2Q8N412 459 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 OR4X2Q8NGF9 303 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 CHPT1Q8WUD6 406 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 MMP27Q9H306 513 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 IFT46Q9NQC8 304 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 ANAPC10Q9UM13 185 aa17.18■□□□□ 0.34
OTUB1-212ENST00000543988 HLA-DRB1P01911 266 aa17.17■□□□□ 0.34
OTUB1-212ENST00000543988 HLA-DQB1P01920 261 aa17.17■□□□□ 0.34
OTUB1-212ENST00000543988 TMBIM6P55061 237 aa17.17■□□□□ 0.34
OTUB1-212ENST00000543988 PDPNQ86YL7 162 aa17.17■□□□□ 0.34
OTUB1-212ENST00000543988 FAM110DQ8TAY7 271 aaPredicted RBP17.17■□□□□ 0.34
OTUB1-212ENST00000543988 BCL7BQ9BQE9 202 aa17.17■□□□□ 0.34
OTUB1-212ENST00000543988 FBXL15Q9H469 300 aa17.17■□□□□ 0.34
OTUB1-212ENST00000543988 SLC35D1Q9NTN3 355 aa17.17■□□□□ 0.34
OTUB1-212ENST00000543988 KIAA1456Q9P272 454 aa17.17■□□□□ 0.34
OTUB1-212ENST00000543988 MRPS7Q9Y2R9 242 aaKnown RBP17.17■□□□□ 0.34
OTUB1-212ENST00000543988 TET2Q6N021 2002 aaPredicted RBP17.16■□□□□ 0.34
OTUB1-212ENST00000543988 A0A1W2PRX2 142 aa17.16■□□□□ 0.34
OTUB1-212ENST00000543988 RRHO14718 337 aa17.16■□□□□ 0.34
OTUB1-212ENST00000543988 PRSS3P35030 304 aa17.16■□□□□ 0.34
OTUB1-212ENST00000543988 THBS3P49746 956 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms