RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 COTL1Q14019 142 aa12.57□□□□□ -0.4
AC005840.4-201ENST00000541242 RAET1LQ5VY80 246 aa12.57□□□□□ -0.4
AC005840.4-201ENST00000541242 C11orf42Q8N5U0 333 aa12.57□□□□□ -0.4
AC005840.4-201ENST00000541242 HSPB9Q9BQS6 159 aa12.57□□□□□ -0.4
AC005840.4-201ENST00000541242 DNAJC4Q9NNZ3 241 aa12.57□□□□□ -0.4
AC005840.4-201ENST00000541242 ASCL3Q9NQ33 180 aa12.57□□□□□ -0.4
AC005840.4-201ENST00000541242 OR1A1Q9P1Q5 309 aa12.57□□□□□ -0.4
AC005840.4-201ENST00000541242 RNF114Q9Y508 228 aa12.57□□□□□ -0.4
AC005840.4-201ENST00000541242 ATP23Q9Y6H3 246 aa12.57□□□□□ -0.4
AC005840.4-201ENST00000541242 TNFSF11O14788 317 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 HS3ST1O14792 307 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 CD82P27701 267 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 TFF3Q07654 80 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 ACSF3Q4G176 576 aaPredicted RBP12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 LINC01551Q86U37 167 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 NEIL1Q96FI4 390 aaPredicted RBP12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 IMMP1LQ96LU5 166 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 C20orf144Q9BQM9 153 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 WDR54Q9H977 334 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 USF3Q68DE3 2245 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 CTXND1A0A1B0GTU2 59 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 C11orf94C9JXX5 98 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 LAMTOR5O43504 91 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 WNT2P09544 360 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 COX6A1P12074 109 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 GPM6AP51674 278 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 FFAR4Q5NUL3 377 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 ZNF324BQ6AW86 544 aaPredicted RBP12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 TEX43Q6ZNM6 134 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 Q6ZS49 121 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 TMEM144Q7Z5S9 345 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 SGMS2Q8NHU3 365 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 RDH5Q92781 318 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 ZNF488Q96MN9 340 aa12.56□□□□□ -0.4
AC005840.4-201ENST00000541242 CLDN1O95832 211 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 CCL3P10147 92 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 ATP5G3P48201 142 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 LCN2P80188 198 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 SSPNQ14714 243 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 TRIM61Q5EBN2 209 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 AGBL5Q8NDL9 886 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 VAMP8Q9BV40 100 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 SRXN1Q9BYN0 137 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 PROK2Q9HC23 129 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 OR2W1Q9Y3N9 320 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 MLNRO43193 412 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 RBFOX2O43251 390 aaKnown RBP eCLIP12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 SERF1AO75920 110 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 IGLV2-14P01704 120 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 CBLN1P23435 193 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 RAB7AP51149 207 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 SOX8P57073 446 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 GNB1P62873 340 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 MMDQ15546 238 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 LPAL2Q16609 132 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 PEAR1Q5VY43 1037 aaPredicted RBP12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 SGCZQ96LD1 299 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 TMEM204Q9BSN7 226 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 ZDHHC11Q9H8X9 412 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 ELOVL5Q9NYP7 299 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 MTCH1Q9NZJ7 389 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 FOXJ2Q9P0K8 574 aa12.55□□□□□ -0.4
AC005840.4-201ENST00000541242 KIR2DS1A0A191URI9 304 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 OR6C6A6NF89 314 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 NDUFB4O95168 129 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 KIR2DS4P43632 304 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 KIR2DS1Q14954 304 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 ZNF585BQ52M93 769 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 OR51B6Q9H340 312 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 NCOR1O75376 2440 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 A0A0J9YW62 118 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 FRMD6-AS1P0C7T7 363 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 SLC25A6P12236 298 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 CCNOP22674 350 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 CHRNB4P30926 498 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 BPIFB3P59826 476 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 TMEM183BQ1AE95 376 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 SLC23A3Q6PIS1 610 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 NUFIP2Q7Z417 695 aaKnown RBP12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 RNASE8Q8TDE3 154 aaKnown RBP12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 TMEM9BQ9NQ34 198 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 GTF3C1Q12789 2109 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 DOCK7Q96N67 2140 aa12.54□□□□□ -0.4
AC005840.4-201ENST00000541242 CCL2P13500 99 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 S100GP29377 79 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 THBS3P49746 956 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 Q6ZVH6 145 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 OR56B2PQ8NGI1 322 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 OR1L1Q8NH94 360 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 FAM103A1Q9BTL3 118 aaKnown RBP12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 RYDENQ9NUL5 291 aaKnown RBP12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 TMEM38BQ9NVV0 291 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 CLN8Q9UBY8 286 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 KCNS2Q9ULS6 477 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 NCKAP5O14513 1909 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 TECTAO75443 2155 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 SYNGR1O43759 233 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 VENTXO95231 258 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 COMPP49747 757 aaPredicted RBP12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 TPPP2P59282 170 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms