RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 FOXRED2Q8IWF2 684 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 NPBQ8NG41 125 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 OR4X2Q8NGF9 303 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 RASL11BQ9BPW5 248 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 MRPS26Q9BYN8 205 aaKnown RBP10.35□□□□□ -0.75
LTBR-208ENST00000541005 ZNF221Q9UK13 617 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 WASHC3Q9Y3C0 194 aa10.35□□□□□ -0.75
LTBR-208ENST00000541005 NBR2O15453 112 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 OPN1MWP04001 364 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 CTXN2P0C2S0 81 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 OPN1MW2P0DN77 364 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 OPN1MW3P0DN78 364 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 SOX6P35712 828 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 HIST2H2BDQ6DRA6 164 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 ANKRD13BQ86YJ7 626 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 STPG2Q8N412 459 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 RITA1Q96K30 269 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 NOL4LQ96MY1 436 aaPredicted RBP10.34□□□□□ -0.75
LTBR-208ENST00000541005 RNF5Q99942 180 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 GINS4Q9BRT9 223 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 OR2D2Q9H210 308 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 AUNIPQ9H7T9 357 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 DIABLOQ9NR28 239 aa10.34□□□□□ -0.75
LTBR-208ENST00000541005 TRAV18A0A075B6X5 111 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 XRCC3O43542 346 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 HLA-DRB1P01911 266 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 IGF1P05019 195 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 TFAP2AP05549 437 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 ALDH3B2P48448 385 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 VBP1P61758 197 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 CTF1Q16619 201 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 C5orf64Q2M2E5 130 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 CNIH2Q6PI25 160 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 C10orf99Q6UWK7 81 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 GLDNQ6ZMI3 551 aaPredicted RBP10.33□□□□□ -0.76
LTBR-208ENST00000541005 PDPNQ86YL7 162 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 COMMD1Q8N668 190 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 ZNF383Q8NA42 475 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 OR4F17Q8NGA8 305 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 RBMXL1Q96E39 390 aaKnown RBP10.33□□□□□ -0.76
LTBR-208ENST00000541005 OR4F4Q96R69 305 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 HSPB9Q9BQS6 159 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 ST6GALNAC5Q9BVH7 336 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 GON7Q9BXV9 100 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 RNF150Q9ULK6 438 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 TSSC4Q9Y5U2 329 aaPredicted RBP10.33□□□□□ -0.76
LTBR-208ENST00000541005 CMYA5Q8N3K9 4069 aa10.33□□□□□ -0.76
LTBR-208ENST00000541005 LINC01548A6NM66 108 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 M0R1X1 148 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 OR8U9P0C7N5 309 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 CNTFRP26992 372 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 SLC35B1P78383 322 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 CFHR3Q02985 330 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 NSUN5P1Q3KNT7 163 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 SAMD12Q8N8I0 201 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 RNF152Q8N8N0 203 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 OR8U1Q8NH10 309 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 FAM110DQ8TAY7 271 aaPredicted RBP10.32□□□□□ -0.76
LTBR-208ENST00000541005 S100A16Q96FQ6 103 aaKnown RBP10.32□□□□□ -0.76
LTBR-208ENST00000541005 C5orf30Q96GV9 206 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 CMTM3Q96MX0 182 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 SDHAF2Q9NX18 166 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 ZNF107Q9UII5 783 aaPredicted RBP10.32□□□□□ -0.76
LTBR-208ENST00000541005 ANXA10Q9UJ72 324 aa10.32□□□□□ -0.76
LTBR-208ENST00000541005 TCRBV4S1A1TA0A5B7 111 aa10.31□□□□□ -0.76
LTBR-208ENST00000541005 RRHO14718 337 aa10.31□□□□□ -0.76
LTBR-208ENST00000541005 TUSC2O75896 110 aa10.31□□□□□ -0.76
LTBR-208ENST00000541005 SPDEFO95238 335 aa10.31□□□□□ -0.76
LTBR-208ENST00000541005 APOA2P02652 100 aa10.31□□□□□ -0.76
LTBR-208ENST00000541005 TAGLNQ01995 201 aaKnown RBP10.31□□□□□ -0.76
LTBR-208ENST00000541005 ZNF329Q86UD4 541 aa10.31□□□□□ -0.76
LTBR-208ENST00000541005 HOGA1Q86XE5 327 aa10.31□□□□□ -0.76
LTBR-208ENST00000541005 DRAXINQ8NBI3 349 aaPredicted RBP10.31□□□□□ -0.76
LTBR-208ENST00000541005 ACOT12Q8WYK0 555 aa10.31□□□□□ -0.76
LTBR-208ENST00000541005 NAA50Q9GZZ1 169 aaKnown RBP10.31□□□□□ -0.76
LTBR-208ENST00000541005 KIAA1456Q9P272 454 aa10.31□□□□□ -0.76
LTBR-208ENST00000541005 ANAPC10Q9UM13 185 aa10.31□□□□□ -0.76
LTBR-208ENST00000541005 OR2W1Q9Y3N9 320 aa10.31□□□□□ -0.76
LTBR-208ENST00000541005 MEGF8Q7Z7M0 2845 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 IGHV7-81A0A0B4J1V7 117 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 H7C2Y5 167 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 HLA-DQB1P01920 261 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 APOA1P02647 267 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 IGKV1-16P04430 117 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 OR5H8P0DN80 308 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 SLC6A1P30531 599 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 CBX5P45973 191 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 THBS3P49746 956 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 CRIP2P52943 208 aaPredicted RBP10.3□□□□□ -0.76
LTBR-208ENST00000541005 LINC00205P59089 165 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 FOXE3Q13461 319 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 TMEM69Q5SWH9 247 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 LIN54Q6MZP7 749 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 TEX38Q6PEX7 206 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 GPR141Q7Z602 305 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 BEST4Q8NFU0 473 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 DDB2Q92466 427 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 R3HDM4Q96D70 268 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 ADTRPQ96IZ2 230 aa10.3□□□□□ -0.76
LTBR-208ENST00000541005 TSNAXQ99598 290 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms