RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 A6NJ64 397 aa14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 H0YJW9 148 aa14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 GPR12P47775 334 aa14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 CD83Q01151 205 aa14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 C2orf68Q2NKX9 166 aa14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 NSUN5P1Q3KNT7 163 aa14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 SLC35E3Q7Z769 313 aa14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 H1FOOQ8IZA3 346 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 GVQW1Q8N7I0 195 aa14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 SAMD12Q8N8I0 201 aa14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 OR5AN1Q8NGI8 311 aa14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 HSPB9Q9BQS6 159 aa14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 DIABLOQ9NR28 239 aa14.45□□□□□ -0.1
SNRPA1-203ENST00000540017 CSF1P09603 554 aa14.44□□□□□ -0.1
SNRPA1-203ENST00000540017 MMDQ15546 238 aa14.44□□□□□ -0.1
SNRPA1-203ENST00000540017 UBE2NLQ5JXB2 153 aa14.44□□□□□ -0.1
SNRPA1-203ENST00000540017 ZNF329Q86UD4 541 aa14.44□□□□□ -0.1
SNRPA1-203ENST00000540017 ZNF383Q8NA42 475 aa14.44□□□□□ -0.1
SNRPA1-203ENST00000540017 FAM110DQ8TAY7 271 aaPredicted RBP14.44□□□□□ -0.1
SNRPA1-203ENST00000540017 RASL11BQ9BPW5 248 aa14.44□□□□□ -0.1
SNRPA1-203ENST00000540017 GINS4Q9BRT9 223 aa14.44□□□□□ -0.1
SNRPA1-203ENST00000540017 OR2D2Q9H210 308 aa14.44□□□□□ -0.1
SNRPA1-203ENST00000540017 MMP27Q9H306 513 aa14.44□□□□□ -0.1
SNRPA1-203ENST00000540017 SDHAF2Q9NX18 166 aa14.44□□□□□ -0.1
SNRPA1-203ENST00000540017 XRCC3O43542 346 aa14.43□□□□□ -0.1
SNRPA1-203ENST00000540017 EIF4EP06730 217 aaKnown RBP14.43□□□□□ -0.1
SNRPA1-203ENST00000540017 KCTD12Q96CX2 325 aaKnown RBP14.43□□□□□ -0.1
SNRPA1-203ENST00000540017 S100A16Q96FQ6 103 aaKnown RBP14.43□□□□□ -0.1
SNRPA1-203ENST00000540017 ANXA10Q9UJ72 324 aa14.43□□□□□ -0.1
SNRPA1-203ENST00000540017 OR5H14A6NHG9 310 aa14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 M0R1X1 148 aa14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 NBR2O15453 112 aa14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 FCER2P06734 321 aa14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 NFYAP23511 347 aaPredicted RBP14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 CNIH2Q6PI25 160 aa14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 GPR141Q7Z602 305 aa14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 NDUFA11Q86Y39 141 aa14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 STPG2Q8N412 459 aa14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 NPBQ8NG41 125 aa14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 COMMD3Q9UBI1 195 aa14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 ZNF107Q9UII5 783 aaPredicted RBP14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 GAB2Q9UQC2 676 aa14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 WASHC3Q9Y3C0 194 aa14.42□□□□□ -0.1
SNRPA1-203ENST00000540017 A0A1W2PRX2 142 aa14.41□□□□□ -0.1
SNRPA1-203ENST00000540017 PSMB11A5LHX3 300 aa14.41□□□□□ -0.1
SNRPA1-203ENST00000540017 MEIS3P1A6NDR6 274 aa14.41□□□□□ -0.1
SNRPA1-203ENST00000540017 H7C2Y5 167 aa14.41□□□□□ -0.1
SNRPA1-203ENST00000540017 J3QRK9 145 aa14.41□□□□□ -0.1
SNRPA1-203ENST00000540017 NDUFA3O95167 84 aa14.41□□□□□ -0.1
SNRPA1-203ENST00000540017 IGKV1-16P04430 117 aa14.41□□□□□ -0.1
SNRPA1-203ENST00000540017 MC5RP33032 325 aa14.41□□□□□ -0.1
SNRPA1-203ENST00000540017 SOX6P35712 828 aa14.41□□□□□ -0.1
SNRPA1-203ENST00000540017 HOGA1Q86XE5 327 aa14.41□□□□□ -0.1
SNRPA1-203ENST00000540017 BEST4Q8NFU0 473 aa14.41□□□□□ -0.1
SNRPA1-203ENST00000540017 CHPT1Q8WUD6 406 aa14.41□□□□□ -0.1
SNRPA1-203ENST00000540017 IGKV1D-13A0A0B4J2D9 117 aa14.4□□□□□ -0.1
SNRPA1-203ENST00000540017 TCRBV4S1A1TA0A5B7 111 aa14.4□□□□□ -0.1
SNRPA1-203ENST00000540017 CTXN2P0C2S0 81 aa14.4□□□□□ -0.1
SNRPA1-203ENST00000540017 IGKV1-13P0DP09 117 aa14.4□□□□□ -0.1
SNRPA1-203ENST00000540017 RORCP51449 518 aa14.4□□□□□ -0.1
SNRPA1-203ENST00000540017 TAS2R20P59543 309 aa14.4□□□□□ -0.1
SNRPA1-203ENST00000540017 C5orf64Q2M2E5 130 aa14.4□□□□□ -0.1
SNRPA1-203ENST00000540017 FOXRED2Q8IWF2 684 aa14.4□□□□□ -0.1
SNRPA1-203ENST00000540017 SNAPC3Q92966 411 aa14.4□□□□□ -0.1
SNRPA1-203ENST00000540017 RBM7Q9Y580 266 aaKnown RBP14.4□□□□□ -0.1
SNRPA1-203ENST00000540017 AP4M1O00189 453 aa14.39□□□□□ -0.11
SNRPA1-203ENST00000540017 HLA-DRB1P01911 266 aa14.39□□□□□ -0.11
SNRPA1-203ENST00000540017 HLA-DQB1P01920 261 aa14.39□□□□□ -0.11
SNRPA1-203ENST00000540017 TMEM69Q5SWH9 247 aa14.39□□□□□ -0.11
SNRPA1-203ENST00000540017 OR4X2Q8NGF9 303 aa14.39□□□□□ -0.11
SNRPA1-203ENST00000540017 FBXL15Q9H469 300 aa14.39□□□□□ -0.11
SNRPA1-203ENST00000540017 OR2W1Q9Y3N9 320 aa14.39□□□□□ -0.11
SNRPA1-203ENST00000540017 IGHV7-81A0A0B4J1V7 117 aa14.38□□□□□ -0.11
SNRPA1-203ENST00000540017 FCN1O00602 326 aa14.38□□□□□ -0.11
SNRPA1-203ENST00000540017 RRHO14718 337 aa14.38□□□□□ -0.11
SNRPA1-203ENST00000540017 KCNAB3O43448 404 aa14.38□□□□□ -0.11
SNRPA1-203ENST00000540017 HPGDSO60760 199 aa14.38□□□□□ -0.11
SNRPA1-203ENST00000540017 TUSC2O75896 110 aa14.38□□□□□ -0.11
SNRPA1-203ENST00000540017 ELK1P19419 428 aa14.38□□□□□ -0.11
SNRPA1-203ENST00000540017 SPCS2Q15005 226 aa14.38□□□□□ -0.11
SNRPA1-203ENST00000540017 ACOT12Q8WYK0 555 aa14.38□□□□□ -0.11
SNRPA1-203ENST00000540017 R3HDM4Q96D70 268 aa14.38□□□□□ -0.11
SNRPA1-203ENST00000540017 SLC35D1Q9NTN3 355 aa14.38□□□□□ -0.11
SNRPA1-203ENST00000540017 TSSC4Q9Y5U2 329 aaPredicted RBP14.38□□□□□ -0.11
SNRPA1-203ENST00000540017 LINC00473A8K010 186 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 RBBP9O75884 186 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 IGLV2-14P01704 120 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 APOA1P02647 267 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 OPN1MWP04001 364 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 IGF1P05019 195 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 OPN1MW2P0DN77 364 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 OPN1MW3P0DN78 364 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 LUMP51884 338 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 CFHR3Q02985 330 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 PSG5Q15238 335 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 LIN54Q6MZP7 749 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 PDPNQ86YL7 162 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 CLVS1Q8IUQ0 354 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 DDB2Q92466 427 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms