RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SLC23A1Q9UHI7 598 aa11.78□□□□□ -0.52
USB1-203ENST00000539737 STARD9Q9P2P6 4700 aa11.78□□□□□ -0.52
USB1-203ENST00000539737 TMEM235A6NFC5 223 aa11.77□□□□□ -0.53
USB1-203ENST00000539737 ITGB1BP1O14713 200 aa11.77□□□□□ -0.53
USB1-203ENST00000539737 FABP7O15540 132 aa11.77□□□□□ -0.53
USB1-203ENST00000539737 SCTP09683 121 aa11.77□□□□□ -0.53
USB1-203ENST00000539737 THBS3P49746 956 aa11.77□□□□□ -0.53
USB1-203ENST00000539737 ZNF134P52741 427 aa11.77□□□□□ -0.53
USB1-203ENST00000539737 ZNF260Q3ZCT1 412 aa11.77□□□□□ -0.53
USB1-203ENST00000539737 TGIF2LXQ8IUE1 241 aa11.77□□□□□ -0.53
USB1-203ENST00000539737 CLVS1Q8IUQ0 354 aaPredicted RBP11.77□□□□□ -0.53
USB1-203ENST00000539737 SAMD12Q8N8I0 201 aa11.77□□□□□ -0.53
USB1-203ENST00000539737 OR56B4Q8NH76 319 aa11.77□□□□□ -0.53
USB1-203ENST00000539737 RTN4IP1Q8WWV3 396 aaPredicted RBP11.77□□□□□ -0.53
USB1-203ENST00000539737 ST6GALNAC6Q969X2 333 aa11.77□□□□□ -0.53
USB1-203ENST00000539737 CABLES2Q9BTV7 478 aa11.77□□□□□ -0.53
USB1-203ENST00000539737 TRAV18A0A075B6X5 111 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 IGHV1-3A0A0C4DH29 117 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 PSMB11A5LHX3 300 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 NUDT19A8MXV4 375 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 LANCL1O43813 399 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 REG1BP48304 166 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 RPL23AP62750 156 aaKnown RBP11.76□□□□□ -0.53
USB1-203ENST00000539737 DIAPH2-AS1Q14236 149 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 FAM71F2Q6NXP2 309 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 C5orf24Q7Z6I8 188 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 MOB3BQ86TA1 216 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 IZUMO1Q8IYV9 350 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 DRAM1Q8N682 238 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 NUDCD2Q8WVJ2 157 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 DPF1Q92782 380 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 S100A16Q96FQ6 103 aaKnown RBP11.76□□□□□ -0.53
USB1-203ENST00000539737 CMTM3Q96MX0 182 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 LYSTQ99698 3801 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 IFI27L2Q9H2X8 130 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 GHITMQ9H3K2 345 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 OR1A1Q9P1Q5 309 aa11.76□□□□□ -0.53
USB1-203ENST00000539737 LINC01548A6NM66 108 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 FAM90A9PA6NNJ1 464 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 FGF16O43320 207 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 CEACAM6P40199 344 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 TMBIM6P55061 237 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 SLC35B1P78383 322 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 TMEM69Q5SWH9 247 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 MZT2AQ6P582 158 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 KLHL30-AS1Q8NEE0 82 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 OR10J5Q8NHC4 309 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 CHPT1Q8WUD6 406 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 MAFIPQ8WZ33 124 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 PIPOXQ9P0Z9 390 aa11.75□□□□□ -0.53
USB1-203ENST00000539737 ZNF230Q9UIE0 474 aaPredicted RBP11.75□□□□□ -0.53
USB1-203ENST00000539737 ELF5Q9UKW6 265 aaPredicted RBP11.75□□□□□ -0.53
USB1-203ENST00000539737 SAA2-SAA4A0A096LPE2 208 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 IGKV1-6A0A0C4DH72 117 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 RAB29O14966 203 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 BET1O15155 118 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 ST8SIA5O15466 376 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 XRCC3O43542 346 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 DUS4LO95620 317 aaKnown RBP11.74□□□□□ -0.53
USB1-203ENST00000539737 APOA1P02647 267 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 SAA2P0DJI9 122 aaPredicted RBP11.74□□□□□ -0.53
USB1-203ENST00000539737 ZNF182P17025 639 aaPredicted RBP11.74□□□□□ -0.53
USB1-203ENST00000539737 SOX6P35712 828 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 HNF4GQ14541 408 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 ZNF833PQ6ZTB9 187 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 FOXRED2Q8IWF2 684 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 S1PR3Q99500 378 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 GINS4Q9BRT9 223 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 GPR61Q9BZJ8 451 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 TOLLIPQ9H0E2 274 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 AUNIPQ9H7T9 357 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 COMMD3Q9UBI1 195 aa11.74□□□□□ -0.53
USB1-203ENST00000539737 TRBV6-7A0A0A0MS04 114 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 NCBP2LA6PVI3 153 aaKnown RBP11.73□□□□□ -0.53
USB1-203ENST00000539737 IGKV1D-33P01593 117 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 IGKV1-33P01594 117 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 CTXN2P0C2S0 81 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 GSTT2P0CG29 244 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 GSTT2BP0CG30 244 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 CD1BP29016 333 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 CBX5P45973 191 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 DGCR2P98153 550 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 SLC35E3Q7Z769 313 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 ODF3L1Q8IXM7 274 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 OR2T10Q8NGZ9 312 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 RAX2Q96IS3 184 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 P2RX4Q99571 388 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 ST6GALNAC5Q9BVH7 336 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 RDH8Q9NYR8 311 aa11.73□□□□□ -0.53
USB1-203ENST00000539737 LSM4Q9Y4Z0 139 aaKnown RBP11.73□□□□□ -0.53
USB1-203ENST00000539737 SSX5O60225 188 aa11.72□□□□□ -0.53
USB1-203ENST00000539737 TAS2R20P59543 309 aa11.72□□□□□ -0.53
USB1-203ENST00000539737 LSAMPQ13449 338 aa11.72□□□□□ -0.53
USB1-203ENST00000539737 EBI3Q14213 229 aa11.72□□□□□ -0.53
USB1-203ENST00000539737 SPCS2Q15005 226 aa11.72□□□□□ -0.53
USB1-203ENST00000539737 IGSF11Q5DX21 431 aa11.72□□□□□ -0.53
USB1-203ENST00000539737 COMMD1Q8N668 190 aa11.72□□□□□ -0.53
USB1-203ENST00000539737 C5orf56Q8N8D9 126 aa11.72□□□□□ -0.53
USB1-203ENST00000539737 GON7Q9BXV9 100 aa11.72□□□□□ -0.53
USB1-203ENST00000539737 PARP12Q9H0J9 701 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms