RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 THRSPQ92748 146 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 CENPOQ9BU64 300 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 OR51J1Q9H342 316 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 RDH8Q9NYR8 311 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 HSF4Q9ULV5 492 aa7.49□□□□□ -1.21
SSBP3-215ENST00000533946 TRDCB7Z8K6 153 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 NDUFA3O95167 84 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 IGLV1-40P01703 118 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 IGLV2-23P01705 113 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 IGHG4P01861 327 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 IGF1P05019 195 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 OR8U9P0C7N5 309 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 APELAP0DMC3 54 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 RAB3BP20337 219 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 SDC2P34741 201 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 CX3CL1P78423 397 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 TAGLNQ01995 201 aaKnown RBP7.48□□□□□ -1.21
SSBP3-215ENST00000533946 PSG5Q15238 335 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 NEDD8Q15843 81 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 ECSCRQ19T08 205 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 LY6G6FQ5SQ64 297 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 TEX38Q6PEX7 206 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 ZNF554Q86TJ5 538 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 FOXRED2Q8IWF2 684 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 OR8U1Q8NH10 309 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 NUDCD2Q8WVJ2 157 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 RAB3CQ96E17 227 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 URM1Q9BTM9 101 aaKnown RBP7.48□□□□□ -1.21
SSBP3-215ENST00000533946 C12orf4Q9NQ89 552 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 SDHAF2Q9NX18 166 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 ABRACLQ9P1F3 81 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 SCOCQ9UIL1 159 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 RAB22AQ9UL26 194 aa7.48□□□□□ -1.21
SSBP3-215ENST00000533946 IGKV1D-13A0A0B4J2D9 117 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 H3BUI4 141 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 I3L521 148 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 M0R1X1 148 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 RRHO14718 337 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 FABP7O15540 132 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 HLA-DRB1P01911 266 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 IGKV1-13P0DP09 117 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 HIST1H1DP16402 221 aaKnown RBP7.47□□□□□ -1.21
SSBP3-215ENST00000533946 HSPA13P48723 471 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 GABARAPL2P60520 117 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 EGFEM1PQ0D2K5 195 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 FOXE3Q13461 319 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 TRAM1Q15629 374 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 CDNFQ49AH0 187 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 LIN54Q6MZP7 749 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 C19orf35Q6ZS72 473 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 ZNF491Q8N8L2 437 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 MINDY2Q8NBR6 621 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 OR56B1Q8NGI3 324 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 OR5AN1Q8NGI8 311 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 LGALS14Q8TCE9 139 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 PTX4Q96A99 478 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 SLC25A38Q96DW6 304 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 MS4A10Q96PG2 267 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 PRR25Q96S07 402 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 CHCHD6Q9BRQ6 235 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 ATG5Q9H1Y0 275 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 DAPK2Q9UIK4 370 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 ADAM30Q9UKF2 790 aa7.47□□□□□ -1.21
SSBP3-215ENST00000533946 RRP15Q9Y3B9 282 aaKnown RBP7.47□□□□□ -1.21
SSBP3-215ENST00000533946 TRBV6-7A0A0A0MS04 114 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 TRAV41A0A0B4J266 112 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 TMEM235A6NFC5 223 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 LINC00473A8K010 186 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 H7C2Y5 167 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 RAB29O14966 203 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 HSPA12AO43301 675 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 TXNL1O43396 289 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 CA2P00918 260 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 IGLV2-14P01704 120 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 IGHV3-11P01762 117 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 CRYGBP07316 175 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 ZBTB25P24278 435 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 PSMA1P25786 263 aaKnown RBP7.46□□□□□ -1.22
SSBP3-215ENST00000533946 MYCNOSP40205 109 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 CDX1P47902 265 aaPredicted RBP7.46□□□□□ -1.22
SSBP3-215ENST00000533946 SLURP1P55000 103 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 BRWD1-AS2P59051 145 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 RPL30P62888 115 aaKnown RBP7.46□□□□□ -1.22
SSBP3-215ENST00000533946 SLC35B1P78383 322 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 TMEM30BQ3MIR4 351 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 DEFB121Q5J5C9 76 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 ZNF773Q6PK81 442 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 HAPLN4Q86UW8 402 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 GVQW1Q8N7I0 195 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 CABLES2Q9BTV7 478 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 OR2D2Q9H210 308 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 VCX3BQ9H321 246 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 ZFP57Q9NU63 452 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 METTL1Q9UBP6 276 aaKnown RBP7.46□□□□□ -1.22
SSBP3-215ENST00000533946 LRRC42Q9Y546 428 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 NUBP2Q9Y5Y2 271 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 DNAH7Q8WXX0 4024 aa7.46□□□□□ -1.22
SSBP3-215ENST00000533946 IGHV4OR15-8A0A075B7B6 117 aa7.45□□□□□ -1.22
SSBP3-215ENST00000533946 A0A087WW49 117 aa7.45□□□□□ -1.22
SSBP3-215ENST00000533946 LOC100506127A0A0U1RQW1 187 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms