RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 AGMATQ9BSE5 352 aa10.62□□□□□ -0.71
CAPN1-227ENST00000533909 OR2D2Q9H210 308 aa10.62□□□□□ -0.71
CAPN1-227ENST00000533909 SMIM31A0A1B0GVY4 71 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 AP4M1O00189 453 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 NBR2O15453 112 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 TSPAN15O95858 294 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 CT45A6P0DMU7 189 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 CT45A5P0DMU8 189 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 CT45A7P0DMV0 189 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 RORCP51449 518 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 TMEM69Q5SWH9 247 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 HIST2H2BDQ6DRA6 164 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 GLDNQ6ZMI3 551 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-227ENST00000533909 NDUFA11Q86Y39 141 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 Q8N9W7 124 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 DRAXINQ8NBI3 349 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-227ENST00000533909 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-227ENST00000533909 OR4F17Q8NGA8 305 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 AP3S1Q92572 193 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 OR4F4Q96R69 305 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 CITED2Q99967 270 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-227ENST00000533909 GON7Q9BXV9 100 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 ABCG5Q9H222 651 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 AUNIPQ9H7T9 357 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 COMMD3Q9UBI1 195 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 WASHC3Q9Y3C0 194 aa10.61□□□□□ -0.71
CAPN1-227ENST00000533909 A0A1W2PRX2 142 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 XRCC3O43542 346 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 RBBP9O75884 186 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 IGHG2P01859 326 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 PF4V1P10720 104 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 CBX5P45973 191 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 F2RL1P55085 397 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 CNIH2Q6PI25 160 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 ANKRD13BQ86YJ7 626 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 BEST4Q8NFU0 473 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 ACOT12Q8WYK0 555 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 NOL4LQ96MY1 436 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-227ENST00000533909 IFT46Q9NQC8 304 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 PLSCR3Q9NRY6 295 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 ZNF107Q9UII5 783 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-227ENST00000533909 ANXA10Q9UJ72 324 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 NOTCH1P46531 2555 aa10.6□□□□□ -0.71
CAPN1-227ENST00000533909 TRRAPQ9Y4A5 3859 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 IGKV1D-8A0A087WSZ0 117 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 H0YJW9 148 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 J3QRK9 145 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 SSX5O60225 188 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 NOL3O60936 208 aaKnown RBP10.59□□□□□ -0.71
CAPN1-227ENST00000533909 GABARAPO95166 117 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 VDAC1P21796 283 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 LUMP51884 338 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-227ENST00000533909 RPS16P62249 146 aaKnown RBP10.59□□□□□ -0.71
CAPN1-227ENST00000533909 MZT2AQ6P582 158 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 ZNF329Q86UD4 541 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 H1FOOQ8IZA3 346 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-227ENST00000533909 FAM71E2Q8N5Q1 922 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 R3HDM4Q96D70 268 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 RBMXL1Q96E39 390 aaKnown RBP10.59□□□□□ -0.71
CAPN1-227ENST00000533909 TOLLIPQ9H0E2 274 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 LINC00527Q9UJ94 153 aa10.59□□□□□ -0.71
CAPN1-227ENST00000533909 TSSC4Q9Y5U2 329 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-227ENST00000533909 NFYAP23511 347 aaPredicted RBP10.58□□□□□ -0.72
CAPN1-227ENST00000533909 CNTFRP26992 372 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 CD83Q01151 205 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 TAGLNQ01995 201 aaKnown RBP10.58□□□□□ -0.72
CAPN1-227ENST00000533909 RTL8BQ17RB0 113 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 C5orf64Q2M2E5 130 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 LIN54Q6MZP7 749 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 STPG2Q8N412 459 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 COMMD1Q8N668 190 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 OR5AN1Q8NGI8 311 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 WIPF2Q8TF74 440 aaPredicted RBP10.58□□□□□ -0.72
CAPN1-227ENST00000533909 ABHD5Q8WTS1 349 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 FLYWCH2Q96CP2 140 aaKnown RBP10.58□□□□□ -0.72
CAPN1-227ENST00000533909 RITA1Q96K30 269 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 TSNAXQ99598 290 aaKnown RBP10.58□□□□□ -0.72
CAPN1-227ENST00000533909 NAA50Q9GZZ1 169 aaKnown RBP10.58□□□□□ -0.72
CAPN1-227ENST00000533909 PARP11Q9NR21 331 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 SLC35D1Q9NTN3 355 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 SDHAF2Q9NX18 166 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 MRPS7Q9Y2R9 242 aaKnown RBP10.58□□□□□ -0.72
CAPN1-227ENST00000533909 OR2W1Q9Y3N9 320 aa10.58□□□□□ -0.72
CAPN1-227ENST00000533909 FAM25AB3EWG3 89 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 FAM25CB3EWG5 89 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 FAM25GB3EWG6 89 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 RRHO14718 337 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 SLC22A5O76082 557 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 FCER2P06734 321 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 OR5H8P0DN80 308 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 PRSS3P35030 304 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 THBS3P49746 956 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 TAS2R20P59543 309 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 CTF1Q16619 201 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 TEX38Q6PEX7 206 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 C10orf99Q6UWK7 81 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 HOGA1Q86XE5 327 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 PDPNQ86YL7 162 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 CLVS1Q8IUQ0 354 aaPredicted RBP10.57□□□□□ -0.72
CAPN1-227ENST00000533909 GVQW1Q8N7I0 195 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms