RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 WASHC3Q9Y3C0 194 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 VWFP04275 2813 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 H0YJW9 148 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 NBR2O15453 112 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 APOA2P02652 100 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 CT45A6P0DMU7 189 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 CT45A5P0DMU8 189 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 CT45A7P0DMV0 189 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 VBP1P61758 197 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 CD83Q01151 205 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 CNIH2Q6PI25 160 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 GPR141Q7Z602 305 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 H1FOOQ8IZA3 346 aaPredicted RBP12.53□□□□□ -0.4
TSKU-204ENST00000533752 COMMD1Q8N668 190 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 SAMD12Q8N8I0 201 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 OR4F17Q8NGA8 305 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 ACOT12Q8WYK0 555 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 OR4F4Q96R69 305 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 CITED2Q99967 270 aaPredicted RBP12.53□□□□□ -0.4
TSKU-204ENST00000533752 OR2D2Q9H210 308 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 RNF150Q9ULK6 438 aa12.53□□□□□ -0.4
TSKU-204ENST00000533752 RBM7Q9Y580 266 aaKnown RBP12.53□□□□□ -0.4
TSKU-204ENST00000533752 H7C2Y5 167 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 XRCC3O43542 346 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 OR8U9P0C7N5 309 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 CBX5P45973 191 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 F2RL1P55085 397 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 TAGLNQ01995 201 aaKnown RBP12.52□□□□□ -0.41
TSKU-204ENST00000533752 NSUN5P1Q3KNT7 163 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 STPG2Q8N412 459 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 NPBQ8NG41 125 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 OR8U1Q8NH10 309 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 CMTM3Q96MX0 182 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 RNF5Q99942 180 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 AUNIPQ9H7T9 357 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 ZNF107Q9UII5 783 aaPredicted RBP12.52□□□□□ -0.41
TSKU-204ENST00000533752 ANXA10Q9UJ72 324 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 ZNF580Q9UK33 172 aa12.52□□□□□ -0.41
TSKU-204ENST00000533752 TSSC4Q9Y5U2 329 aaPredicted RBP12.52□□□□□ -0.41
TSKU-204ENST00000533752 IGKV1D-8A0A087WSZ0 117 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 TCRBV4S1A1TA0A5B7 111 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 M0R1X1 148 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 SSX5O60225 188 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 NDUFA3O95167 84 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 HLA-DRB1P01911 266 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 OR5H8P0DN80 308 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 RORCP51449 518 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 ARPC4P59998 168 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 CBX3Q13185 183 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 C5orf64Q2M2E5 130 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 TMEM69Q5SWH9 247 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 PDPNQ86YL7 162 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 AP3S1Q92572 193 aa12.51□□□□□ -0.41
TSKU-204ENST00000533752 SLC22A5O76082 557 aa12.5□□□□□ -0.41
TSKU-204ENST00000533752 SPDEFO95238 335 aa12.5□□□□□ -0.41
TSKU-204ENST00000533752 ALDH3B2P48448 385 aa12.5□□□□□ -0.41
TSKU-204ENST00000533752 CTF1Q16619 201 aa12.5□□□□□ -0.41
TSKU-204ENST00000533752 GPR107Q5VW38 600 aa12.5□□□□□ -0.41
TSKU-204ENST00000533752 GLDNQ6ZMI3 551 aaPredicted RBP12.5□□□□□ -0.41
TSKU-204ENST00000533752 BEST4Q8NFU0 473 aa12.5□□□□□ -0.41
TSKU-204ENST00000533752 FAM110DQ8TAY7 271 aaPredicted RBP12.5□□□□□ -0.41
TSKU-204ENST00000533752 ADTRPQ96IZ2 230 aa12.5□□□□□ -0.41
TSKU-204ENST00000533752 NOL4LQ96MY1 436 aaPredicted RBP12.5□□□□□ -0.41
TSKU-204ENST00000533752 TSNAXQ99598 290 aaKnown RBP12.5□□□□□ -0.41
TSKU-204ENST00000533752 SDHAF2Q9NX18 166 aa12.5□□□□□ -0.41
TSKU-204ENST00000533752 OR2W1Q9Y3N9 320 aa12.5□□□□□ -0.41
TSKU-204ENST00000533752 RRHO14718 337 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 PROP1O75360 226 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 APOA1P02647 267 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 IGF1P05019 195 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 VDAC1P21796 283 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 THBS3P49746 956 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 LUMP51884 338 aaPredicted RBP12.49□□□□□ -0.41
TSKU-204ENST00000533752 PLGLAQ15195 96 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 RTL8BQ17RB0 113 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 TCTEX1D4Q5JR98 221 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 KHDC1LQ5JSQ8 128 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 LIN54Q6MZP7 749 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 TEX38Q6PEX7 206 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 ZNF329Q86UD4 541 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 HOGA1Q86XE5 327 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 ZNF383Q8NA42 475 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 DRAXINQ8NBI3 349 aaPredicted RBP12.49□□□□□ -0.41
TSKU-204ENST00000533752 R3HDM4Q96D70 268 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 HSPB9Q9BQS6 159 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 IFT46Q9NQC8 304 aa12.49□□□□□ -0.41
TSKU-204ENST00000533752 ADARB2-AS1A8MUL3 147 aa12.48□□□□□ -0.41
TSKU-204ENST00000533752 RRASP10301 218 aa12.48□□□□□ -0.41
TSKU-204ENST00000533752 PF4V1P10720 104 aa12.48□□□□□ -0.41
TSKU-204ENST00000533752 CNTFRP26992 372 aa12.48□□□□□ -0.41
TSKU-204ENST00000533752 SLC6A1P30531 599 aa12.48□□□□□ -0.41
TSKU-204ENST00000533752 TAS2R20P59543 309 aa12.48□□□□□ -0.41
TSKU-204ENST00000533752 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
TSKU-204ENST00000533752 MZT2AQ6P582 158 aa12.48□□□□□ -0.41
TSKU-204ENST00000533752 ZNF645Q8N7E2 425 aa12.48□□□□□ -0.41
TSKU-204ENST00000533752 FLYWCH2Q96CP2 140 aaKnown RBP12.48□□□□□ -0.41
TSKU-204ENST00000533752 RITA1Q96K30 269 aa12.48□□□□□ -0.41
TSKU-204ENST00000533752 NAA50Q9GZZ1 169 aaKnown RBP12.48□□□□□ -0.41
TSKU-204ENST00000533752 SLC35D1Q9NTN3 355 aa12.48□□□□□ -0.41
TSKU-204ENST00000533752 NECAP2Q9NVZ3 263 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms