RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 C9orf66Q5T8R8 295 aa12.05□□□□□ -0.48
CPSF1-211ENST00000533492 PTX4Q96A99 478 aa12.05□□□□□ -0.48
CPSF1-211ENST00000533492 RAB3CQ96E17 227 aa12.05□□□□□ -0.48
CPSF1-211ENST00000533492 RNF5Q99942 180 aa12.05□□□□□ -0.48
CPSF1-211ENST00000533492 KLK15Q9H2R5 256 aa12.05□□□□□ -0.48
CPSF1-211ENST00000533492 RAB26Q9ULW5 256 aa12.05□□□□□ -0.48
CPSF1-211ENST00000533492 TRAV1-2A0A0B4J238 106 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 SEC14L6B5MCN3 397 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 LDLRAD4O15165 306 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 RAMP3O60896 148 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 IGLV1-40P01703 118 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 GADD45AP24522 165 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 RAB9AP51151 201 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 TMEM267Q0VDI3 215 aaPredicted RBP12.04□□□□□ -0.48
CPSF1-211ENST00000533492 DCTN2Q13561 401 aaKnown RBP12.04□□□□□ -0.48
CPSF1-211ENST00000533492 SSX1Q16384 188 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 ZNF491Q8N8L2 437 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 DRAXINQ8NBI3 349 aaPredicted RBP12.04□□□□□ -0.48
CPSF1-211ENST00000533492 OR5AN1Q8NGI8 311 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 OR1N2Q8NGR9 330 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 OR5B12Q96R08 314 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 RDH8Q9NYR8 311 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 A3GALT2U3KPV4 340 aa12.04□□□□□ -0.48
CPSF1-211ENST00000533492 TRDV1A0A1B0GX56 115 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 A0A1W2PN81 502 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 TFAP2AP05549 437 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 RAB3BP20337 219 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 CHRNA7P36544 502 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 SERPINB10P48595 397 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 LUMP51884 338 aaPredicted RBP12.03□□□□□ -0.48
CPSF1-211ENST00000533492 OR10A3P58181 314 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 RPS16P62249 146 aaKnown RBP12.03□□□□□ -0.48
CPSF1-211ENST00000533492 CX3CL1P78423 397 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 CD69Q07108 199 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 PLA2G7Q13093 441 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 OR4A4PQ8NGN8 299 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 OR10R2Q8NGX6 335 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 MYOZ3Q8TDC0 251 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 CLCC1Q96S66 551 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 TSNAXQ99598 290 aaKnown RBP12.03□□□□□ -0.48
CPSF1-211ENST00000533492 GNB4Q9HAV0 340 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 NDUFB11Q9NX14 153 aa12.03□□□□□ -0.48
CPSF1-211ENST00000533492 METTL1Q9UBP6 276 aaKnown RBP12.03□□□□□ -0.48
CPSF1-211ENST00000533492 A0A075B6Q4 140 aa12.02□□□□□ -0.49
CPSF1-211ENST00000533492 IGKV1-6A0A0C4DH72 117 aa12.02□□□□□ -0.49
CPSF1-211ENST00000533492 METTL21EPA6NDL7 271 aa12.02□□□□□ -0.49
CPSF1-211ENST00000533492 IFITM5A6NNB3 132 aa12.02□□□□□ -0.49
CPSF1-211ENST00000533492 FCN1O00602 326 aa12.02□□□□□ -0.49
CPSF1-211ENST00000533492 BET1O15155 118 aa12.02□□□□□ -0.49
CPSF1-211ENST00000533492 FABP7O15540 132 aa12.02□□□□□ -0.49
CPSF1-211ENST00000533492 APOA2P02652 100 aa12.02□□□□□ -0.49
CPSF1-211ENST00000533492 OR8U8P0C7N1 319 aa12.02□□□□□ -0.49
CPSF1-211ENST00000533492 KIAA0141Q14154 515 aaPredicted RBP12.02□□□□□ -0.49
CPSF1-211ENST00000533492 TCTEX1D1Q8N7M0 179 aa12.02□□□□□ -0.49
CPSF1-211ENST00000533492 MINDY2Q8NBR6 621 aa12.02□□□□□ -0.49
CPSF1-211ENST00000533492 FOXA2Q9Y261 457 aaPredicted RBP12.02□□□□□ -0.49
CPSF1-211ENST00000533492 I3L521 148 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 M0R1X1 148 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 MRPS14O60783 128 aaKnown RBP12.01□□□□□ -0.49
CPSF1-211ENST00000533492 PROP1O75360 226 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 FCGR3AP08637 254 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 GNB3P16520 340 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 RAB6AP20340 208 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 GALP22466 123 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 CD40LGP29965 261 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 TALDO1P37837 337 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 ECI1P42126 302 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 GABARAPL2P60520 117 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 NDPQ00604 133 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 RUNX1Q01196 453 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 ZNF616Q08AN1 781 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 FHL3Q13643 280 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 ARFRP1Q13795 201 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 PSG5Q15238 335 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 MOGAT2Q3SYC2 334 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 ZNF260Q3ZCT1 412 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 VAX1Q5SQQ9 334 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 C22orf42Q6IC83 251 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 CD200R1LQ6Q8B3 271 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 PPP1R27Q86WC6 154 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 PDPNQ86YL7 162 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 ZNF383Q8NA42 475 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 OR10J5Q8NHC4 309 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 FLYWCH2Q96CP2 140 aaKnown RBP12.01□□□□□ -0.49
CPSF1-211ENST00000533492 KCNK7Q9Y2U2 307 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 FBXO7Q9Y3I1 522 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 RBM7Q9Y580 266 aaKnown RBP12.01□□□□□ -0.49
CPSF1-211ENST00000533492 NUBP2Q9Y5Y2 271 aa12.01□□□□□ -0.49
CPSF1-211ENST00000533492 SHISA3A0PJX4 238 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 OR8U9P0C7N5 309 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 GSTT2P0CG29 244 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 GSTT2BP0CG30 244 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 CRIP2P52943 208 aaPredicted RBP12□□□□□ -0.49
CPSF1-211ENST00000533492 LINC00205P59089 165 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 GNB1P62873 340 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 ACTBL2Q562R1 376 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 IGSF11Q5DX21 431 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 UNQ5815/PRO19632Q6UWF5 114 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 ZNF562Q6V9R5 426 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 ZNF436-AS1Q8NC38 126 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms