RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 IFITM5A6NNB3 132 aa18.3■□□□□ 0.52
SMPD1-209ENST00000533196 RRHO14718 337 aa18.3■□□□□ 0.52
SMPD1-209ENST00000533196 DIRAS3O95661 229 aa18.3■□□□□ 0.52
SMPD1-209ENST00000533196 GSTP1P09211 210 aaKnown RBP18.3■□□□□ 0.52
SMPD1-209ENST00000533196 CD3GP09693 182 aa18.3■□□□□ 0.52
SMPD1-209ENST00000533196 RAB6AP20340 208 aa18.3■□□□□ 0.52
SMPD1-209ENST00000533196 GADD45AP24522 165 aa18.3■□□□□ 0.52
SMPD1-209ENST00000533196 CRIP2P52943 208 aaPredicted RBP18.3■□□□□ 0.52
SMPD1-209ENST00000533196 TCTEX1D1Q8N7M0 179 aa18.3■□□□□ 0.52
SMPD1-209ENST00000533196 MINDY2Q8NBR6 621 aa18.3■□□□□ 0.52
SMPD1-209ENST00000533196 RAB3CQ96E17 227 aa18.3■□□□□ 0.52
SMPD1-209ENST00000533196 ZNF221Q9UK13 617 aa18.3■□□□□ 0.52
SMPD1-209ENST00000533196 WSB1Q9Y6I7 421 aa18.3■□□□□ 0.52
SMPD1-209ENST00000533196 WI2-2373I1.2A0A1W2PRP0 233 aa18.29■□□□□ 0.52
SMPD1-209ENST00000533196 G3V318 75 aa18.29■□□□□ 0.52
SMPD1-209ENST00000533196 H7C2Y5 167 aa18.29■□□□□ 0.52
SMPD1-209ENST00000533196 RAMP3O60896 148 aa18.29■□□□□ 0.52
SMPD1-209ENST00000533196 RAB3BP20337 219 aa18.29■□□□□ 0.52
SMPD1-209ENST00000533196 RAB25P57735 213 aa18.29■□□□□ 0.52
SMPD1-209ENST00000533196 RUNX1Q01196 453 aa18.29■□□□□ 0.52
SMPD1-209ENST00000533196 DEFB136Q30KP8 78 aa18.29■□□□□ 0.52
SMPD1-209ENST00000533196 ZNF491Q8N8L2 437 aa18.29■□□□□ 0.52
SMPD1-209ENST00000533196 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.29■□□□□ 0.52
SMPD1-209ENST00000533196 CENPOQ9BU64 300 aa18.29■□□□□ 0.52
SMPD1-209ENST00000533196 VSIG4Q9Y279 399 aa18.29■□□□□ 0.52
SMPD1-209ENST00000533196 IGKV1-6A0A0C4DH72 117 aa18.28■□□□□ 0.52
SMPD1-209ENST00000533196 DGCR2P98153 550 aa18.28■□□□□ 0.52
SMPD1-209ENST00000533196 KIAA0141Q14154 515 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-209ENST00000533196 C9orf66Q5T8R8 295 aa18.28■□□□□ 0.52
SMPD1-209ENST00000533196 GLDNQ6ZMI3 551 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-209ENST00000533196 OR10R2Q8NGX6 335 aa18.28■□□□□ 0.52
SMPD1-209ENST00000533196 FBXL15Q9H469 300 aa18.28■□□□□ 0.52
SMPD1-209ENST00000533196 RDH8Q9NYR8 311 aa18.28■□□□□ 0.52
SMPD1-209ENST00000533196 GAB2Q9UQC2 676 aa18.28■□□□□ 0.52
SMPD1-209ENST00000533196 KCNK7Q9Y2U2 307 aa18.28■□□□□ 0.52
SMPD1-209ENST00000533196 SHISA3A0PJX4 238 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 METTL21EPA6NDL7 271 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 FABP7O15540 132 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 PROP1O75360 226 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 SPDEFO95238 335 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 RAB9AP51151 201 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 CX3CL1P78423 397 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 TMEM267Q0VDI3 215 aaPredicted RBP18.27■□□□□ 0.52
SMPD1-209ENST00000533196 ARL6IP1Q15041 203 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 PLGLAQ15195 96 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 DEFB121Q5J5C9 76 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 UBE2UQ5VVX9 321 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 PDPNQ86YL7 162 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 OR11H1Q8NG94 326 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 CABLES2Q9BTV7 478 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 Q9H521 79 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 RNF150Q9ULK6 438 aa18.27■□□□□ 0.52
SMPD1-209ENST00000533196 I3L521 148 aa18.26■□□□□ 0.51
SMPD1-209ENST00000533196 RAB27BO00194 218 aa18.26■□□□□ 0.51
SMPD1-209ENST00000533196 ATP6V1G2O95670 118 aa18.26■□□□□ 0.51
SMPD1-209ENST00000533196 TFAP2AP05549 437 aa18.26■□□□□ 0.51
SMPD1-209ENST00000533196 OR10A3P58181 314 aa18.26■□□□□ 0.51
SMPD1-209ENST00000533196 PLA2G7Q13093 441 aa18.26■□□□□ 0.51
SMPD1-209ENST00000533196 SRSF7Q16629 238 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMPD1-209ENST00000533196 C19orf54Q5BKX5 351 aa18.26■□□□□ 0.51
SMPD1-209ENST00000533196 FCGR1BQ92637 280 aa18.26■□□□□ 0.51
SMPD1-209ENST00000533196 TSNAXQ99598 290 aaKnown RBP18.26■□□□□ 0.51
SMPD1-209ENST00000533196 YTHDF1Q9BYJ9 559 aaKnown RBP18.26■□□□□ 0.51
SMPD1-209ENST00000533196 KLK15Q9H2R5 256 aa18.26■□□□□ 0.51
SMPD1-209ENST00000533196 MFNGO00587 321 aa18.25■□□□□ 0.51
SMPD1-209ENST00000533196 APOA2P02652 100 aa18.25■□□□□ 0.51
SMPD1-209ENST00000533196 FCGR3AP08637 254 aa18.25■□□□□ 0.51
SMPD1-209ENST00000533196 OR8U8P0C7N1 319 aa18.25■□□□□ 0.51
SMPD1-209ENST00000533196 HIST1H1DP16402 221 aaKnown RBP18.25■□□□□ 0.51
SMPD1-209ENST00000533196 NDPQ00604 133 aa18.25■□□□□ 0.51
SMPD1-209ENST00000533196 MOGAT2Q3SYC2 334 aa18.25■□□□□ 0.51
SMPD1-209ENST00000533196 PYHIN1Q6K0P9 492 aa18.25■□□□□ 0.51
SMPD1-209ENST00000533196 FOXA2Q9Y261 457 aaPredicted RBP18.25■□□□□ 0.51
SMPD1-209ENST00000533196 NUBP2Q9Y5Y2 271 aa18.25■□□□□ 0.51
SMPD1-209ENST00000533196 TRBV6-7A0A0A0MS04 114 aa18.24■□□□□ 0.51
SMPD1-209ENST00000533196 FGF9P31371 208 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-209ENST00000533196 PSG5Q15238 335 aa18.24■□□□□ 0.51
SMPD1-209ENST00000533196 ECSCRQ19T08 205 aa18.24■□□□□ 0.51
SMPD1-209ENST00000533196 C22orf42Q6IC83 251 aa18.24■□□□□ 0.51
SMPD1-209ENST00000533196 ZNF562Q6V9R5 426 aa18.24■□□□□ 0.51
SMPD1-209ENST00000533196 Q6ZS49 121 aa18.24■□□□□ 0.51
SMPD1-209ENST00000533196 ZNF383Q8NA42 475 aa18.24■□□□□ 0.51
SMPD1-209ENST00000533196 OR1N2Q8NGR9 330 aa18.24■□□□□ 0.51
SMPD1-209ENST00000533196 OR10J5Q8NHC4 309 aa18.24■□□□□ 0.51
SMPD1-209ENST00000533196 GNB4Q9HAV0 340 aa18.24■□□□□ 0.51
SMPD1-209ENST00000533196 METTL1Q9UBP6 276 aaKnown RBP18.24■□□□□ 0.51
SMPD1-209ENST00000533196 FBXO7Q9Y3I1 522 aa18.24■□□□□ 0.51
SMPD1-209ENST00000533196 DNAH9Q9NYC9 4486 aa18.23■□□□□ 0.51
SMPD1-209ENST00000533196 SEC14L6B5MCN3 397 aa18.23■□□□□ 0.51
SMPD1-209ENST00000533196 TAGLNQ01995 201 aaKnown RBP18.23■□□□□ 0.51
SMPD1-209ENST00000533196 ZNF616Q08AN1 781 aa18.23■□□□□ 0.51
SMPD1-209ENST00000533196 AKIRIN2Q53H80 203 aa18.23■□□□□ 0.51
SMPD1-209ENST00000533196 SPARTQ8N0X7 666 aa18.23■□□□□ 0.51
SMPD1-209ENST00000533196 DRAXINQ8NBI3 349 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-209ENST00000533196 FLYWCH2Q96CP2 140 aaKnown RBP18.23■□□□□ 0.51
SMPD1-209ENST00000533196 SORL1Q92673 2214 aa18.22■□□□□ 0.51
SMPD1-209ENST00000533196 A0A1W2PN81 502 aa18.22■□□□□ 0.51
SMPD1-209ENST00000533196 M0R1X1 148 aa18.22■□□□□ 0.51
SMPD1-209ENST00000533196 FCN1O00602 326 aa18.22■□□□□ 0.51
SMPD1-209ENST00000533196 GSTT2P0CG29 244 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms