RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 GAB2Q9UQC2 676 aa17.42■□□□□ 0.38
PTPRK-222ENST00000532751 SMIM31A0A1B0GVY4 71 aa17.41■□□□□ 0.38
PTPRK-222ENST00000532751 H7C2Y5 167 aa17.41■□□□□ 0.38
PTPRK-222ENST00000532751 IGHG2P01859 326 aa17.41■□□□□ 0.38
PTPRK-222ENST00000532751 APOA1P02647 267 aa17.41■□□□□ 0.38
PTPRK-222ENST00000532751 ZNF182P17025 639 aaPredicted RBP17.41■□□□□ 0.38
PTPRK-222ENST00000532751 F2RL1P55085 397 aa17.41■□□□□ 0.38
PTPRK-222ENST00000532751 ARPC4P59998 168 aa17.41■□□□□ 0.38
PTPRK-222ENST00000532751 C2orf68Q2NKX9 166 aa17.41■□□□□ 0.38
PTPRK-222ENST00000532751 GLDNQ6ZMI3 551 aaPredicted RBP17.41■□□□□ 0.38
PTPRK-222ENST00000532751 HOGA1Q86XE5 327 aa17.41■□□□□ 0.38
PTPRK-222ENST00000532751 FOXRED2Q8IWF2 684 aa17.41■□□□□ 0.38
PTPRK-222ENST00000532751 WIPF2Q8TF74 440 aaPredicted RBP17.41■□□□□ 0.38
PTPRK-222ENST00000532751 WASHC3Q9Y3C0 194 aa17.41■□□□□ 0.38
PTPRK-222ENST00000532751 H0YJW9 148 aa17.4■□□□□ 0.38
PTPRK-222ENST00000532751 TAS2R20P59543 309 aa17.4■□□□□ 0.38
PTPRK-222ENST00000532751 FAM71E2Q8N5Q1 922 aa17.4■□□□□ 0.38
PTPRK-222ENST00000532751 OR5AU1Q8NGC0 362 aa17.4■□□□□ 0.38
PTPRK-222ENST00000532751 OR5AN1Q8NGI8 311 aa17.4■□□□□ 0.38
PTPRK-222ENST00000532751 RAB2BQ8WUD1 216 aa17.4■□□□□ 0.38
PTPRK-222ENST00000532751 BCL7BQ9BQE9 202 aa17.4■□□□□ 0.38
PTPRK-222ENST00000532751 KIAA1456Q9P272 454 aa17.4■□□□□ 0.38
PTPRK-222ENST00000532751 M0R1X1 148 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 NBR2O15453 112 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 KCNAB3O43448 404 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 NOL3O60936 208 aaKnown RBP17.39■□□□□ 0.37
PTPRK-222ENST00000532751 RBBP9O75884 186 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 APOA2P02652 100 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 EIF4EP06730 217 aaKnown RBP17.39■□□□□ 0.37
PTPRK-222ENST00000532751 CD28P10747 220 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 PTHLHP12272 177 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 SOX6P35712 828 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 GVQW1Q8N7I0 195 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 OR4X2Q8NGF9 303 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 CHPT1Q8WUD6 406 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 RBMXL1Q96E39 390 aaKnown RBP17.39■□□□□ 0.37
PTPRK-222ENST00000532751 IFT46Q9NQC8 304 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 SDHAF2Q9NX18 166 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 SCOCQ9UIL1 159 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 OR2W1Q9Y3N9 320 aa17.39■□□□□ 0.37
PTPRK-222ENST00000532751 PROP1O75360 226 aa17.38■□□□□ 0.37
PTPRK-222ENST00000532751 CSF1P09603 554 aa17.38■□□□□ 0.37
PTPRK-222ENST00000532751 NFYAP23511 347 aaPredicted RBP17.38■□□□□ 0.37
PTPRK-222ENST00000532751 LUMP51884 338 aaPredicted RBP17.38■□□□□ 0.37
PTPRK-222ENST00000532751 TMBIM6P55061 237 aa17.38■□□□□ 0.37
PTPRK-222ENST00000532751 TREML4Q6UXN2 200 aa17.38■□□□□ 0.37
PTPRK-222ENST00000532751 DRAXINQ8NBI3 349 aaPredicted RBP17.38■□□□□ 0.37
PTPRK-222ENST00000532751 RNF5Q99942 180 aa17.38■□□□□ 0.37
PTPRK-222ENST00000532751 PSMB11A5LHX3 300 aa17.37■□□□□ 0.37
PTPRK-222ENST00000532751 FAM25AB3EWG3 89 aa17.37■□□□□ 0.37
PTPRK-222ENST00000532751 FAM25CB3EWG5 89 aa17.37■□□□□ 0.37
PTPRK-222ENST00000532751 FAM25GB3EWG6 89 aa17.37■□□□□ 0.37
PTPRK-222ENST00000532751 HPGDSO60760 199 aa17.37■□□□□ 0.37
PTPRK-222ENST00000532751 PRSS3P35030 304 aa17.37■□□□□ 0.37
PTPRK-222ENST00000532751 PDPNQ86YL7 162 aa17.37■□□□□ 0.37
PTPRK-222ENST00000532751 ZNF383Q8NA42 475 aa17.37■□□□□ 0.37
PTPRK-222ENST00000532751 NPBQ8NG41 125 aa17.37■□□□□ 0.37
PTPRK-222ENST00000532751 NECAP2Q9NVZ3 263 aa17.37■□□□□ 0.37
PTPRK-222ENST00000532751 MEIS3P1A6NDR6 274 aa17.36■□□□□ 0.37
PTPRK-222ENST00000532751 J3QRK9 145 aa17.36■□□□□ 0.37
PTPRK-222ENST00000532751 AP4M1O00189 453 aa17.36■□□□□ 0.37
PTPRK-222ENST00000532751 SLC22A5O76082 557 aa17.36■□□□□ 0.37
PTPRK-222ENST00000532751 CNTFRP26992 372 aa17.36■□□□□ 0.37
PTPRK-222ENST00000532751 THBS3P49746 956 aa17.36■□□□□ 0.37
PTPRK-222ENST00000532751 SLC35B1P78383 322 aa17.36■□□□□ 0.37
PTPRK-222ENST00000532751 TAGLNQ01995 201 aaKnown RBP17.36■□□□□ 0.37
PTPRK-222ENST00000532751 NDUFA11Q86Y39 141 aa17.36■□□□□ 0.37
PTPRK-222ENST00000532751 RITA1Q96K30 269 aa17.36■□□□□ 0.37
PTPRK-222ENST00000532751 GON7Q9BXV9 100 aa17.36■□□□□ 0.37
PTPRK-222ENST00000532751 MMP27Q9H306 513 aa17.36■□□□□ 0.37
PTPRK-222ENST00000532751 SLC35D1Q9NTN3 355 aa17.36■□□□□ 0.37
PTPRK-222ENST00000532751 ZNF107Q9UII5 783 aaPredicted RBP17.36■□□□□ 0.37
PTPRK-222ENST00000532751 MRPS7Q9Y2R9 242 aaKnown RBP17.36■□□□□ 0.37
PTPRK-222ENST00000532751 NDUFA3O95167 84 aa17.35■□□□□ 0.37
PTPRK-222ENST00000532751 HLA-DQB1P01920 261 aa17.35■□□□□ 0.37
PTPRK-222ENST00000532751 ELK1P19419 428 aa17.35■□□□□ 0.37
PTPRK-222ENST00000532751 CBX3Q13185 183 aa17.35■□□□□ 0.37
PTPRK-222ENST00000532751 SPCS2Q15005 226 aa17.35■□□□□ 0.37
PTPRK-222ENST00000532751 C5orf64Q2M2E5 130 aa17.35■□□□□ 0.37
PTPRK-222ENST00000532751 NSUN5P1Q3KNT7 163 aa17.35■□□□□ 0.37
PTPRK-222ENST00000532751 STPG2Q8N412 459 aa17.35■□□□□ 0.37
PTPRK-222ENST00000532751 ZNF645Q8N7E2 425 aa17.35■□□□□ 0.37
PTPRK-222ENST00000532751 ADTRPQ96IZ2 230 aa17.35■□□□□ 0.37
PTPRK-222ENST00000532751 NOL4LQ96MY1 436 aaPredicted RBP17.35■□□□□ 0.37
PTPRK-222ENST00000532751 CITED2Q99967 270 aaPredicted RBP17.35■□□□□ 0.37
PTPRK-222ENST00000532751 LINC00527Q9UJ94 153 aa17.35■□□□□ 0.37
PTPRK-222ENST00000532751 HLA-DRB1P01911 266 aa17.34■□□□□ 0.37
PTPRK-222ENST00000532751 OPN1MWP04001 364 aa17.34■□□□□ 0.37
PTPRK-222ENST00000532751 FCER2P06734 321 aa17.34■□□□□ 0.37
PTPRK-222ENST00000532751 OPN1MW2P0DN77 364 aa17.34■□□□□ 0.37
PTPRK-222ENST00000532751 OPN1MW3P0DN78 364 aa17.34■□□□□ 0.37
PTPRK-222ENST00000532751 RPS16P62249 146 aaKnown RBP17.34■□□□□ 0.37
PTPRK-222ENST00000532751 CD83Q01151 205 aa17.34■□□□□ 0.37
PTPRK-222ENST00000532751 PLGLAQ15195 96 aa17.34■□□□□ 0.37
PTPRK-222ENST00000532751 HIST2H2BDQ6DRA6 164 aa17.34■□□□□ 0.37
PTPRK-222ENST00000532751 OR5AP2Q8NGF4 316 aa17.34■□□□□ 0.37
PTPRK-222ENST00000532751 FLYWCH2Q96CP2 140 aaKnown RBP17.34■□□□□ 0.37
PTPRK-222ENST00000532751 TSNAXQ99598 290 aaKnown RBP17.34■□□□□ 0.37
PTPRK-222ENST00000532751 TCRBV4S1A1TA0A5B7 111 aa17.33■□□□□ 0.36
PTPRK-222ENST00000532751 LINC01548A6NM66 108 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms