RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CD3GP09693 182 aa13.91□□□□□ -0.18
SMG1-203ENST00000532700 RPS19P39019 145 aaKnown RBP13.91□□□□□ -0.18
SMG1-203ENST00000532700 ALDH3B2P48448 385 aa13.91□□□□□ -0.18
SMG1-203ENST00000532700 SLC35B1P78383 322 aa13.91□□□□□ -0.18
SMG1-203ENST00000532700 HLA-DRB3P79483 266 aa13.91□□□□□ -0.18
SMG1-203ENST00000532700 PNLIPRP3Q17RR3 467 aa13.91□□□□□ -0.18
SMG1-203ENST00000532700 ANKRD13BQ86YJ7 626 aa13.91□□□□□ -0.18
SMG1-203ENST00000532700 LGALS14Q8TCE9 139 aa13.91□□□□□ -0.18
SMG1-203ENST00000532700 CMSS1Q9BQ75 279 aaKnown RBP13.91□□□□□ -0.18
SMG1-203ENST00000532700 C11orf54Q9H0W9 315 aaPredicted RBP13.91□□□□□ -0.18
SMG1-203ENST00000532700 Q9N2K0 584 aa13.91□□□□□ -0.18
SMG1-203ENST00000532700 C12orf4Q9NQ89 552 aa13.91□□□□□ -0.18
SMG1-203ENST00000532700 ABRACLQ9P1F3 81 aa13.91□□□□□ -0.18
SMG1-203ENST00000532700 SLC23A1Q9UHI7 598 aa13.91□□□□□ -0.18
SMG1-203ENST00000532700 WSB1Q9Y6I7 421 aa13.91□□□□□ -0.18
SMG1-203ENST00000532700 RAB27BO00194 218 aa13.9□□□□□ -0.18
SMG1-203ENST00000532700 IGHG4P01861 327 aa13.9□□□□□ -0.18
SMG1-203ENST00000532700 IGF1P05019 195 aa13.9□□□□□ -0.18
SMG1-203ENST00000532700 TFAP2AP05549 437 aa13.9□□□□□ -0.18
SMG1-203ENST00000532700 PPIFP30405 207 aaKnown RBP13.9□□□□□ -0.18
SMG1-203ENST00000532700 TGFBR1P36897 503 aa13.9□□□□□ -0.18
SMG1-203ENST00000532700 SERPINB10P48595 397 aa13.9□□□□□ -0.18
SMG1-203ENST00000532700 EGFEM1PQ0D2K5 195 aa13.9□□□□□ -0.18
SMG1-203ENST00000532700 KIAA0141Q14154 515 aaPredicted RBP13.9□□□□□ -0.18
SMG1-203ENST00000532700 TEX38Q6PEX7 206 aa13.9□□□□□ -0.18
SMG1-203ENST00000532700 OR8H1Q8NGG4 311 aa13.9□□□□□ -0.18
SMG1-203ENST00000532700 ZFP57Q9NU63 452 aa13.9□□□□□ -0.18
SMG1-203ENST00000532700 RNF150Q9ULK6 438 aa13.9□□□□□ -0.18
SMG1-203ENST00000532700 NBR2O15453 112 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 HIST1H1DP16402 221 aaKnown RBP13.89□□□□□ -0.19
SMG1-203ENST00000532700 PSMB8P28062 276 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 VBP1P61758 197 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 FOXE3Q13461 319 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 ASPHD1Q5U4P2 390 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 GPR107Q5VW38 600 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 COMMD1Q8N668 190 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 DRAXINQ8NBI3 349 aaPredicted RBP13.89□□□□□ -0.19
SMG1-203ENST00000532700 MYOZ3Q8TDC0 251 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 CASTOR1Q8WTX7 329 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 MAFIPQ8WZ33 124 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 C5orf30Q96GV9 206 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 FBXL15Q9H469 300 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 GNB4Q9HAV0 340 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 RHBDL2Q9NX52 303 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 ELF5Q9UKW6 265 aaPredicted RBP13.89□□□□□ -0.19
SMG1-203ENST00000532700 GAB2Q9UQC2 676 aa13.89□□□□□ -0.19
SMG1-203ENST00000532700 A0A075B6Q4 140 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 H0YJW9 148 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 CCL24O00175 119 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 FCN1O00602 326 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 SOX15O60248 233 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 RGS11O94810 467 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 GABARAPO95166 117 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 NDUFA3O95167 84 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 HLA-DRB1P01911 266 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 GNB3P16520 340 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 CEACAM6P40199 344 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 MYCNOSP40205 109 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 RPL5P46777 297 aaKnown RBP13.88□□□□□ -0.19
SMG1-203ENST00000532700 LUMP51884 338 aaPredicted RBP13.88□□□□□ -0.19
SMG1-203ENST00000532700 NCS1P62166 190 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 C5orf64Q2M2E5 130 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 C19orf54Q5BKX5 351 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 NPBQ8NG41 125 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 SLC25A46Q96AG3 418 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 OR51J1Q9H342 316 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 PARP11Q9NR21 331 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 SPATA2Q9UM82 520 aa13.88□□□□□ -0.19
SMG1-203ENST00000532700 COL7A1Q02388 2944 aa13.87□□□□□ -0.19
SMG1-203ENST00000532700 MFNGO00587 321 aa13.87□□□□□ -0.19
SMG1-203ENST00000532700 EGR2P11161 476 aaPredicted RBP13.87□□□□□ -0.19
SMG1-203ENST00000532700 TALDO1P37837 337 aa13.87□□□□□ -0.19
SMG1-203ENST00000532700 ARFRP1Q13795 201 aa13.87□□□□□ -0.19
SMG1-203ENST00000532700 CXorf66Q5JRM2 361 aaPredicted RBP13.87□□□□□ -0.19
SMG1-203ENST00000532700 OR5H6Q8NGV6 325 aa13.87□□□□□ -0.19
SMG1-203ENST00000532700 KCTD12Q96CX2 325 aaKnown RBP13.87□□□□□ -0.19
SMG1-203ENST00000532700 TPSG1Q9NRR2 321 aa13.87□□□□□ -0.19
SMG1-203ENST00000532700 SCOCQ9UIL1 159 aa13.87□□□□□ -0.19
SMG1-203ENST00000532700 ZNF580Q9UK33 172 aa13.87□□□□□ -0.19
SMG1-203ENST00000532700 IGKV1D-8A0A087WSZ0 117 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 A0A0A6YYH2 397 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 A6NJ64 397 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 IGLV1-40P01703 118 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 ELANEP08246 267 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 VDAC1P21796 283 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 CDX1P47902 265 aaPredicted RBP13.86□□□□□ -0.19
SMG1-203ENST00000532700 RAB25P57735 213 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 CTF1Q16619 201 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 CDNFQ49AH0 187 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 IGSF11Q5DX21 431 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 ZNF383Q8NA42 475 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 OR5B12Q96R08 314 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMG1-203ENST00000532700 DIABLOQ9NR28 239 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 PIPOXQ9P0Z9 390 aa13.86□□□□□ -0.19
SMG1-203ENST00000532700 ZNF230Q9UIE0 474 aaPredicted RBP13.86□□□□□ -0.19
SMG1-203ENST00000532700 RAB29O14966 203 aa13.85□□□□□ -0.19
SMG1-203ENST00000532700 IGKV1-16P04430 117 aa13.85□□□□□ -0.19
SMG1-203ENST00000532700 FCGR3AP08637 254 aa13.85□□□□□ -0.19
SMG1-203ENST00000532700 GSTP1P09211 210 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms